Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.76■■□□□ 1.07
Lysmd3Q99LE3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lysmd3Q99LE3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lysmd3Q99LE3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Lysmd3Q99LE3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Lysmd3Q99LE3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lysmd3Q99LE3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.75■■□□□ 1.07
Lysmd3Q99LE3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.75■■□□□ 1.07
Lysmd3Q99LE3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lysmd3Q99LE3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Lysmd3Q99LE3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Lysmd3Q99LE3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lysmd3Q99LE3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Lysmd3Q99LE3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.75■■□□□ 1.07
Lysmd3Q99LE3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Lysmd3Q99LE3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lysmd3Q99LE3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Lysmd3Q99LE3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Lysmd3Q99LE3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.73■■□□□ 1.07
Lysmd3Q99LE3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.73■■□□□ 1.07
Lysmd3Q99LE3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.73■■□□□ 1.07
Lysmd3Q99LE3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Lysmd3Q99LE3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lysmd3Q99LE3 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lysmd3Q99LE3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Lysmd3Q99LE3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Lysmd3Q99LE3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
Lysmd3Q99LE3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lysmd3Q99LE3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Lysmd3Q99LE3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lysmd3Q99LE3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lysmd3Q99LE3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.72■■□□□ 1.07
Lysmd3Q99LE3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.72■■□□□ 1.07
Lysmd3Q99LE3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lysmd3Q99LE3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Lysmd3Q99LE3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
Lysmd3Q99LE3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Lysmd3Q99LE3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd3Q99LE3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd3Q99LE3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.7■■□□□ 1.06
Lysmd3Q99LE3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd3Q99LE3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lysmd3Q99LE3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lysmd3Q99LE3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lysmd3Q99LE3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lysmd3Q99LE3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lysmd3Q99LE3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lysmd3Q99LE3 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lysmd3Q99LE3 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lysmd3Q99LE3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Lysmd3Q99LE3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Lysmd3Q99LE3 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.68■■□□□ 1.06
Lysmd3Q99LE3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Lysmd3Q99LE3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.67■■□□□ 1.06
Lysmd3Q99LE3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd3Q99LE3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd3Q99LE3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd3Q99LE3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd3Q99LE3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Lysmd3Q99LE3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Lysmd3Q99LE3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lysmd3Q99LE3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lysmd3Q99LE3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lysmd3Q99LE3 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd3Q99LE3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd3Q99LE3 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd3Q99LE3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd3Q99LE3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd3Q99LE3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd3Q99LE3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd3Q99LE3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd3Q99LE3 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd3Q99LE3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Lysmd3Q99LE3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd3Q99LE3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Lysmd3Q99LE3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Lysmd3Q99LE3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Lysmd3Q99LE3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Lysmd3Q99LE3 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.64■■□□□ 1.05
Lysmd3Q99LE3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lysmd3Q99LE3 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.63■■□□□ 1.05
Lysmd3Q99LE3 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd3Q99LE3 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd3Q99LE3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd3Q99LE3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd3Q99LE3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd3Q99LE3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd3Q99LE3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lysmd3Q99LE3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd3Q99LE3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd3Q99LE3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd3Q99LE3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.62■■□□□ 1.05
Lysmd3Q99LE3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd3Q99LE3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.62■■□□□ 1.05
Lysmd3Q99LE3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Lysmd3Q99LE3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd3Q99LE3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd3Q99LE3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Lysmd3Q99LE3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.62■■□□□ 1.05
Lysmd3Q99LE3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms