Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdhb4Q91XZ6 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb4Q91XZ6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb4Q91XZ6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Pcdhb4Q91XZ6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb4Q91XZ6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb4Q91XZ6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb4Q91XZ6 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdhb4Q91XZ6 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.68■□□□□ 0.9
Pcdhb4Q91XZ6 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb4Q91XZ6 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb4Q91XZ6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb4Q91XZ6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb4Q91XZ6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb4Q91XZ6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb4Q91XZ6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb4Q91XZ6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pcdhb4Q91XZ6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb4Q91XZ6 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb4Q91XZ6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb4Q91XZ6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhb4Q91XZ6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb4Q91XZ6 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb4Q91XZ6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb4Q91XZ6 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb4Q91XZ6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb4Q91XZ6 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb4Q91XZ6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb4Q91XZ6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb4Q91XZ6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhb4Q91XZ6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb4Q91XZ6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdhb4Q91XZ6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb4Q91XZ6 Cap2-205ENSMUST00000225824 1634 ntBASIC20.65■□□□□ 0.9
Pcdhb4Q91XZ6 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb4Q91XZ6 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.65■□□□□ 0.9
Pcdhb4Q91XZ6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb4Q91XZ6 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb4Q91XZ6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb4Q91XZ6 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhb4Q91XZ6 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb4Q91XZ6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb4Q91XZ6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb4Q91XZ6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Pcdhb4Q91XZ6 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcdhb4Q91XZ6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb4Q91XZ6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb4Q91XZ6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb4Q91XZ6 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb4Q91XZ6 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb4Q91XZ6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb4Q91XZ6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb4Q91XZ6 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb4Q91XZ6 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Pcdhb4Q91XZ6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
Pcdhb4Q91XZ6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb4Q91XZ6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb4Q91XZ6 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb4Q91XZ6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pcdhb4Q91XZ6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb4Q91XZ6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb4Q91XZ6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb4Q91XZ6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb4Q91XZ6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb4Q91XZ6 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.6■□□□□ 0.89
Pcdhb4Q91XZ6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb4Q91XZ6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.6■□□□□ 0.89
Pcdhb4Q91XZ6 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb4Q91XZ6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.6■□□□□ 0.89
Pcdhb4Q91XZ6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb4Q91XZ6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb4Q91XZ6 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb4Q91XZ6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb4Q91XZ6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb4Q91XZ6 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb4Q91XZ6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Pcdhb4Q91XZ6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhb4Q91XZ6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb4Q91XZ6 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb4Q91XZ6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb4Q91XZ6 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb4Q91XZ6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb4Q91XZ6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb4Q91XZ6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb4Q91XZ6 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdhb4Q91XZ6 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb4Q91XZ6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb4Q91XZ6 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb4Q91XZ6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb4Q91XZ6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Pcdhb4Q91XZ6 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb4Q91XZ6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb4Q91XZ6 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhb4Q91XZ6 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb4Q91XZ6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Pcdhb4Q91XZ6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb4Q91XZ6 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb4Q91XZ6 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb4Q91XZ6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb4Q91XZ6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 115.9 ms