Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx41Q91VN6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Ddx41Q91VN6 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx41Q91VN6 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Ddx41Q91VN6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Ddx41Q91VN6 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx41Q91VN6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC23.91■■□□□ 1.42
Ddx41Q91VN6 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx41Q91VN6 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.91■■□□□ 1.42
Ddx41Q91VN6 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx41Q91VN6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx41Q91VN6 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
Ddx41Q91VN6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx41Q91VN6 Gm43006-201ENSMUST00000197702 1602 ntBASIC23.91■■□□□ 1.42
Ddx41Q91VN6 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx41Q91VN6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Ddx41Q91VN6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx41Q91VN6 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx41Q91VN6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx41Q91VN6 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
Ddx41Q91VN6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Ddx41Q91VN6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC23.9■■□□□ 1.42
Ddx41Q91VN6 Gm10399-202ENSMUST00000202768 748 ntBASIC23.89■■□□□ 1.41
Ddx41Q91VN6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.89■■□□□ 1.41
Ddx41Q91VN6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx41Q91VN6 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Ddx41Q91VN6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx41Q91VN6 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC23.88■■□□□ 1.41
Ddx41Q91VN6 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx41Q91VN6 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.88■■□□□ 1.41
Ddx41Q91VN6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Ddx41Q91VN6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
Ddx41Q91VN6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx41Q91VN6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx41Q91VN6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx41Q91VN6 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx41Q91VN6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
Ddx41Q91VN6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Ddx41Q91VN6 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx41Q91VN6 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx41Q91VN6 Gm22238-201ENSMUST00000175222 88 ntBASIC23.87■■□□□ 1.41
Ddx41Q91VN6 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Ddx41Q91VN6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC23.87■■□□□ 1.41
Ddx41Q91VN6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Ddx41Q91VN6 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx41Q91VN6 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx41Q91VN6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.86■■□□□ 1.41
Ddx41Q91VN6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx41Q91VN6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx41Q91VN6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Ddx41Q91VN6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC23.86■■□□□ 1.41
Ddx41Q91VN6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx41Q91VN6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Ddx41Q91VN6 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Ddx41Q91VN6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx41Q91VN6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC23.85■■□□□ 1.41
Ddx41Q91VN6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx41Q91VN6 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Ddx41Q91VN6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.84■■□□□ 1.41
Ddx41Q91VN6 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Ddx41Q91VN6 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx41Q91VN6 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx41Q91VN6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Ddx41Q91VN6 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Ddx41Q91VN6 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.83■■□□□ 1.4
Ddx41Q91VN6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ddx41Q91VN6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.4
Ddx41Q91VN6 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx41Q91VN6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx41Q91VN6 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Ddx41Q91VN6 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.82■■□□□ 1.4
Ddx41Q91VN6 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx41Q91VN6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC23.81■■□□□ 1.4
Ddx41Q91VN6 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx41Q91VN6 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx41Q91VN6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx41Q91VN6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Ddx41Q91VN6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Ddx41Q91VN6 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx41Q91VN6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx41Q91VN6 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx41Q91VN6 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx41Q91VN6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx41Q91VN6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Ddx41Q91VN6 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx41Q91VN6 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx41Q91VN6 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC23.79■■□□□ 1.4
Ddx41Q91VN6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Ddx41Q91VN6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx41Q91VN6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx41Q91VN6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx41Q91VN6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Ddx41Q91VN6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx41Q91VN6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx41Q91VN6 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx41Q91VN6 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx41Q91VN6 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Ddx41Q91VN6 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx41Q91VN6 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ddx41Q91VN6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms