Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q8VDP2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q8VDP2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q8VDP2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q8VDP2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Q8VDP2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Q8VDP2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Q8VDP2 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q8VDP2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q8VDP2 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q8VDP2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Q8VDP2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Q8VDP2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Q8VDP2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Q8VDP2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
Q8VDP2 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q8VDP2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Q8VDP2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Q8VDP2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q8VDP2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Q8VDP2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Q8VDP2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Q8VDP2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q8VDP2 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q8VDP2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q8VDP2 Grk6-206ENSMUST00000224995 2971 ntBASIC20.2■□□□□ 0.82
Q8VDP2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Q8VDP2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Q8VDP2 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Q8VDP2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Q8VDP2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.19■□□□□ 0.82
Q8VDP2 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8VDP2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8VDP2 Gm6821-201ENSMUST00000107540 542 ntBASIC20.19■□□□□ 0.82
Q8VDP2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Q8VDP2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Q8VDP2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Q8VDP2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8VDP2 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Q8VDP2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Q8VDP2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8VDP2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8VDP2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8VDP2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Q8VDP2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.18■□□□□ 0.82
Q8VDP2 Gm8503-201ENSMUST00000118131 455 ntBASIC20.18■□□□□ 0.82
Q8VDP2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Q8VDP2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8VDP2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Q8VDP2 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q8VDP2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q8VDP2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Q8VDP2 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q8VDP2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Q8VDP2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Q8VDP2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Q8VDP2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8VDP2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8VDP2 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.16■□□□□ 0.82
Q8VDP2 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.16■□□□□ 0.82
Q8VDP2 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Q8VDP2 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.16■□□□□ 0.82
Q8VDP2 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Q8VDP2 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.16■□□□□ 0.82
Q8VDP2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
Q8VDP2 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8VDP2 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8VDP2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Q8VDP2 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.16■□□□□ 0.82
Q8VDP2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8VDP2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8VDP2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.15■□□□□ 0.82
Q8VDP2 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Q8VDP2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Q8VDP2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Q8VDP2 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Q8VDP2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8VDP2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8VDP2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Q8VDP2 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Q8VDP2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Q8VDP2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8VDP2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8VDP2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8VDP2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Q8VDP2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Q8VDP2 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.14■□□□□ 0.81
Q8VDP2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8VDP2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Q8VDP2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Q8VDP2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8VDP2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8VDP2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Q8VDP2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Q8VDP2 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Q8VDP2 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q8VDP2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q8VDP2 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q8VDP2 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Q8VDP2 Gm19439-201ENSMUST00000198195 2273 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms