Protein–RNA interactions for Protein: Q8R4E9

Cdt1, DNA replication factor Cdt1, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdt1Q8R4E9 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.18■□□□□ 0.82
Cdt1Q8R4E9 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdt1Q8R4E9 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cdt1Q8R4E9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdt1Q8R4E9 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdt1Q8R4E9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.17■□□□□ 0.82
Cdt1Q8R4E9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.17■□□□□ 0.82
Cdt1Q8R4E9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.17■□□□□ 0.82
Cdt1Q8R4E9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.17■□□□□ 0.82
Cdt1Q8R4E9 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdt1Q8R4E9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdt1Q8R4E9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdt1Q8R4E9 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdt1Q8R4E9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdt1Q8R4E9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cdt1Q8R4E9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cdt1Q8R4E9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdt1Q8R4E9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdt1Q8R4E9 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdt1Q8R4E9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdt1Q8R4E9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.16■□□□□ 0.82
Cdt1Q8R4E9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdt1Q8R4E9 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdt1Q8R4E9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cdt1Q8R4E9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cdt1Q8R4E9 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Cdt1Q8R4E9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdt1Q8R4E9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdt1Q8R4E9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.15■□□□□ 0.82
Cdt1Q8R4E9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.15■□□□□ 0.82
Cdt1Q8R4E9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Cdt1Q8R4E9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.15■□□□□ 0.82
Cdt1Q8R4E9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdt1Q8R4E9 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cdt1Q8R4E9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cdt1Q8R4E9 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cdt1Q8R4E9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Cdt1Q8R4E9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdt1Q8R4E9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdt1Q8R4E9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.14■□□□□ 0.81
Cdt1Q8R4E9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cdt1Q8R4E9 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdt1Q8R4E9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.13■□□□□ 0.81
Cdt1Q8R4E9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdt1Q8R4E9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdt1Q8R4E9 Gm21956-201ENSMUST00000179946 522 ntBASIC20.13■□□□□ 0.81
Cdt1Q8R4E9 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.13■□□□□ 0.81
Cdt1Q8R4E9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Cdt1Q8R4E9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdt1Q8R4E9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cdt1Q8R4E9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdt1Q8R4E9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdt1Q8R4E9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cdt1Q8R4E9 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdt1Q8R4E9 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.12■□□□□ 0.81
Cdt1Q8R4E9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cdt1Q8R4E9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cdt1Q8R4E9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdt1Q8R4E9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdt1Q8R4E9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cdt1Q8R4E9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdt1Q8R4E9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdt1Q8R4E9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cdt1Q8R4E9 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdt1Q8R4E9 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdt1Q8R4E9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cdt1Q8R4E9 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.1■□□□□ 0.81
Cdt1Q8R4E9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdt1Q8R4E9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdt1Q8R4E9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Cdt1Q8R4E9 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.1■□□□□ 0.81
Cdt1Q8R4E9 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdt1Q8R4E9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdt1Q8R4E9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cdt1Q8R4E9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdt1Q8R4E9 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdt1Q8R4E9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Cdt1Q8R4E9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cdt1Q8R4E9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cdt1Q8R4E9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdt1Q8R4E9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.09■□□□□ 0.81
Cdt1Q8R4E9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdt1Q8R4E9 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdt1Q8R4E9 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.09■□□□□ 0.81
Cdt1Q8R4E9 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cdt1Q8R4E9 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
Cdt1Q8R4E9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdt1Q8R4E9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cdt1Q8R4E9 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdt1Q8R4E9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cdt1Q8R4E9 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.08■□□□□ 0.81
Cdt1Q8R4E9 Gm22238-201ENSMUST00000175222 88 ntBASIC20.08■□□□□ 0.81
Cdt1Q8R4E9 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.08■□□□□ 0.81
Cdt1Q8R4E9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.81
Cdt1Q8R4E9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cdt1Q8R4E9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdt1Q8R4E9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cdt1Q8R4E9 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.08■□□□□ 0.8
Cdt1Q8R4E9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cdt1Q8R4E9 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms