Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Rfc3Q8R323 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Rfc3Q8R323 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rfc3Q8R323 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.21■□□□□ 0.67
Rfc3Q8R323 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.21■□□□□ 0.67
Rfc3Q8R323 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rfc3Q8R323 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc3Q8R323 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc3Q8R323 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc3Q8R323 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc3Q8R323 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.2■□□□□ 0.66
Rfc3Q8R323 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc3Q8R323 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.2■□□□□ 0.66
Rfc3Q8R323 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc3Q8R323 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rfc3Q8R323 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rfc3Q8R323 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.19■□□□□ 0.66
Rfc3Q8R323 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc3Q8R323 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc3Q8R323 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc3Q8R323 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.19■□□□□ 0.66
Rfc3Q8R323 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc3Q8R323 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc3Q8R323 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rfc3Q8R323 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Rfc3Q8R323 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc3Q8R323 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc3Q8R323 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rfc3Q8R323 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Rfc3Q8R323 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rfc3Q8R323 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.18■□□□□ 0.66
Rfc3Q8R323 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc3Q8R323 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc3Q8R323 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Rfc3Q8R323 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc3Q8R323 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.17■□□□□ 0.66
Rfc3Q8R323 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc3Q8R323 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc3Q8R323 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc3Q8R323 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc3Q8R323 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rfc3Q8R323 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc3Q8R323 Gm15039-201ENSMUST00000118914 875 ntBASIC19.16■□□□□ 0.66
Rfc3Q8R323 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.16■□□□□ 0.66
Rfc3Q8R323 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rfc3Q8R323 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc3Q8R323 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc3Q8R323 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc3Q8R323 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc3Q8R323 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfc3Q8R323 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Rfc3Q8R323 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc3Q8R323 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc3Q8R323 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc3Q8R323 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc3Q8R323 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc3Q8R323 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc3Q8R323 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rfc3Q8R323 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc3Q8R323 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.14■□□□□ 0.65
Rfc3Q8R323 Gm10399-202ENSMUST00000202768 748 ntBASIC19.14■□□□□ 0.65
Rfc3Q8R323 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.14■□□□□ 0.65
Rfc3Q8R323 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.14■□□□□ 0.65
Rfc3Q8R323 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rfc3Q8R323 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc3Q8R323 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfc3Q8R323 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rfc3Q8R323 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc3Q8R323 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.13■□□□□ 0.65
Rfc3Q8R323 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc3Q8R323 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc3Q8R323 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Rfc3Q8R323 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.13■□□□□ 0.65
Rfc3Q8R323 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfc3Q8R323 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfc3Q8R323 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rfc3Q8R323 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rfc3Q8R323 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfc3Q8R323 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rfc3Q8R323 Gm22238-201ENSMUST00000175222 88 ntBASIC19.12■□□□□ 0.65
Rfc3Q8R323 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfc3Q8R323 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfc3Q8R323 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfc3Q8R323 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfc3Q8R323 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfc3Q8R323 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rfc3Q8R323 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
Rfc3Q8R323 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc3Q8R323 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc3Q8R323 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc3Q8R323 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc3Q8R323 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc3Q8R323 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.1■□□□□ 0.65
Rfc3Q8R323 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc3Q8R323 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Rfc3Q8R323 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc3Q8R323 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc3Q8R323 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfc3Q8R323 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.1■□□□□ 0.65
Rfc3Q8R323 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms