Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ebf4Q8K4J2 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ebf4Q8K4J2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ebf4Q8K4J2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ebf4Q8K4J2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ebf4Q8K4J2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ebf4Q8K4J2 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.06■□□□□ 0.64
Ebf4Q8K4J2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ebf4Q8K4J2 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ebf4Q8K4J2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf4Q8K4J2 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf4Q8K4J2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf4Q8K4J2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf4Q8K4J2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf4Q8K4J2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ebf4Q8K4J2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ebf4Q8K4J2 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ebf4Q8K4J2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ebf4Q8K4J2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ebf4Q8K4J2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.04■□□□□ 0.64
Ebf4Q8K4J2 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ebf4Q8K4J2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.04■□□□□ 0.64
Ebf4Q8K4J2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ebf4Q8K4J2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ebf4Q8K4J2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ebf4Q8K4J2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf4Q8K4J2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf4Q8K4J2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf4Q8K4J2 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ebf4Q8K4J2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.03■□□□□ 0.64
Ebf4Q8K4J2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf4Q8K4J2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf4Q8K4J2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf4Q8K4J2 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ebf4Q8K4J2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf4Q8K4J2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf4Q8K4J2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.02■□□□□ 0.64
Ebf4Q8K4J2 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf4Q8K4J2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.02■□□□□ 0.64
Ebf4Q8K4J2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ebf4Q8K4J2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ebf4Q8K4J2 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ebf4Q8K4J2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Ebf4Q8K4J2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf4Q8K4J2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf4Q8K4J2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf4Q8K4J2 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.01■□□□□ 0.63
Ebf4Q8K4J2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Ebf4Q8K4J2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ebf4Q8K4J2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Ebf4Q8K4J2 Gm12818-201ENSMUST00000117562 1349 ntBASIC19■□□□□ 0.63
Ebf4Q8K4J2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf4Q8K4J2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ebf4Q8K4J2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Ebf4Q8K4J2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf4Q8K4J2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19■□□□□ 0.63
Ebf4Q8K4J2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ebf4Q8K4J2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ebf4Q8K4J2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ebf4Q8K4J2 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Ebf4Q8K4J2 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ebf4Q8K4J2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.99■□□□□ 0.63
Ebf4Q8K4J2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf4Q8K4J2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf4Q8K4J2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf4Q8K4J2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Ebf4Q8K4J2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC18.99■□□□□ 0.63
Ebf4Q8K4J2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf4Q8K4J2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf4Q8K4J2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Ebf4Q8K4J2 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC18.99■□□□□ 0.63
Ebf4Q8K4J2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Ebf4Q8K4J2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf4Q8K4J2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.98■□□□□ 0.63
Ebf4Q8K4J2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.98■□□□□ 0.63
Ebf4Q8K4J2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf4Q8K4J2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf4Q8K4J2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf4Q8K4J2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ebf4Q8K4J2 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Ebf4Q8K4J2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Ebf4Q8K4J2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Ebf4Q8K4J2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
Ebf4Q8K4J2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Ebf4Q8K4J2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.97■□□□□ 0.63
Ebf4Q8K4J2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.97■□□□□ 0.63
Ebf4Q8K4J2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.97■□□□□ 0.63
Ebf4Q8K4J2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ebf4Q8K4J2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf4Q8K4J2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.96■□□□□ 0.63
Ebf4Q8K4J2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf4Q8K4J2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf4Q8K4J2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf4Q8K4J2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf4Q8K4J2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.96■□□□□ 0.63
Ebf4Q8K4J2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.96■□□□□ 0.63
Ebf4Q8K4J2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf4Q8K4J2 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Ebf4Q8K4J2 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.96■□□□□ 0.63
Ebf4Q8K4J2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 348.6 ms