Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rtn1Q8K0T0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.21■■□□□ 1.47
Rtn1Q8K0T0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
Rtn1Q8K0T0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Rtn1Q8K0T0 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Rtn1Q8K0T0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Rtn1Q8K0T0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Rtn1Q8K0T0 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtn1Q8K0T0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.2■■□□□ 1.46
Rtn1Q8K0T0 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.2■■□□□ 1.46
Rtn1Q8K0T0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rtn1Q8K0T0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.19■■□□□ 1.46
Rtn1Q8K0T0 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.19■■□□□ 1.46
Rtn1Q8K0T0 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Rtn1Q8K0T0 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtn1Q8K0T0 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.19■■□□□ 1.46
Rtn1Q8K0T0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC24.19■■□□□ 1.46
Rtn1Q8K0T0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtn1Q8K0T0 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC24.19■■□□□ 1.46
Rtn1Q8K0T0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtn1Q8K0T0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtn1Q8K0T0 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rtn1Q8K0T0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rtn1Q8K0T0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtn1Q8K0T0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rtn1Q8K0T0 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtn1Q8K0T0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtn1Q8K0T0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtn1Q8K0T0 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtn1Q8K0T0 Gm13042-201ENSMUST00000119244 1955 ntBASIC24.17■■□□□ 1.46
Rtn1Q8K0T0 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Rtn1Q8K0T0 Gm10399-202ENSMUST00000202768 748 ntBASIC24.17■■□□□ 1.46
Rtn1Q8K0T0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.17■■□□□ 1.46
Rtn1Q8K0T0 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rtn1Q8K0T0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC24.17■■□□□ 1.46
Rtn1Q8K0T0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Rtn1Q8K0T0 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtn1Q8K0T0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtn1Q8K0T0 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtn1Q8K0T0 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rtn1Q8K0T0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rtn1Q8K0T0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rtn1Q8K0T0 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rtn1Q8K0T0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC24.14■■□□□ 1.46
Rtn1Q8K0T0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Rtn1Q8K0T0 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.14■■□□□ 1.45
Rtn1Q8K0T0 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.14■■□□□ 1.45
Rtn1Q8K0T0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rtn1Q8K0T0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rtn1Q8K0T0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rtn1Q8K0T0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn1Q8K0T0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn1Q8K0T0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn1Q8K0T0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn1Q8K0T0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn1Q8K0T0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn1Q8K0T0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn1Q8K0T0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn1Q8K0T0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rtn1Q8K0T0 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rtn1Q8K0T0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.12■■□□□ 1.45
Rtn1Q8K0T0 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rtn1Q8K0T0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rtn1Q8K0T0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Rtn1Q8K0T0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rtn1Q8K0T0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rtn1Q8K0T0 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rtn1Q8K0T0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rtn1Q8K0T0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rtn1Q8K0T0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rtn1Q8K0T0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rtn1Q8K0T0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rtn1Q8K0T0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rtn1Q8K0T0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
Rtn1Q8K0T0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rtn1Q8K0T0 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rtn1Q8K0T0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn1Q8K0T0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn1Q8K0T0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn1Q8K0T0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn1Q8K0T0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn1Q8K0T0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.1■■□□□ 1.45
Rtn1Q8K0T0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn1Q8K0T0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn1Q8K0T0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
Rtn1Q8K0T0 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
Rtn1Q8K0T0 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rtn1Q8K0T0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Rtn1Q8K0T0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rtn1Q8K0T0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rtn1Q8K0T0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC24.09■■□□□ 1.45
Rtn1Q8K0T0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Rtn1Q8K0T0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rtn1Q8K0T0 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Rtn1Q8K0T0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Rtn1Q8K0T0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.08■■□□□ 1.45
Rtn1Q8K0T0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.08■■□□□ 1.45
Rtn1Q8K0T0 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.08■■□□□ 1.45
Rtn1Q8K0T0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
Rtn1Q8K0T0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms