Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Rtn4rl1Q8K0S5 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Rtn4rl1Q8K0S5 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.46■■□□□ 1.03
Rtn4rl1Q8K0S5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.46■■□□□ 1.03
Rtn4rl1Q8K0S5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn4rl1Q8K0S5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn4rl1Q8K0S5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Rtn4rl1Q8K0S5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn4rl1Q8K0S5 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.46■■□□□ 1.03
Rtn4rl1Q8K0S5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.46■■□□□ 1.03
Rtn4rl1Q8K0S5 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rtn4rl1Q8K0S5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.45■■□□□ 1.02
Rtn4rl1Q8K0S5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4rl1Q8K0S5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4rl1Q8K0S5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.45■■□□□ 1.02
Rtn4rl1Q8K0S5 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.45■■□□□ 1.02
Rtn4rl1Q8K0S5 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.45■■□□□ 1.02
Rtn4rl1Q8K0S5 Gm21168-201ENSMUST00000199646 1096 ntBASIC21.45■■□□□ 1.02
Rtn4rl1Q8K0S5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4rl1Q8K0S5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Rtn4rl1Q8K0S5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4rl1Q8K0S5 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.45■■□□□ 1.02
Rtn4rl1Q8K0S5 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Rtn4rl1Q8K0S5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
Rtn4rl1Q8K0S5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rtn4rl1Q8K0S5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rtn4rl1Q8K0S5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
Rtn4rl1Q8K0S5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rtn4rl1Q8K0S5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Rtn4rl1Q8K0S5 Gm43017-201ENSMUST00000198296 752 ntBASIC21.44■■□□□ 1.02
Rtn4rl1Q8K0S5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.44■■□□□ 1.02
Rtn4rl1Q8K0S5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Rtn4rl1Q8K0S5 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.44■■□□□ 1.02
Rtn4rl1Q8K0S5 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn4rl1Q8K0S5 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Rtn4rl1Q8K0S5 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn4rl1Q8K0S5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn4rl1Q8K0S5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Rtn4rl1Q8K0S5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rtn4rl1Q8K0S5 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Rtn4rl1Q8K0S5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.42■■□□□ 1.02
Rtn4rl1Q8K0S5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Rtn4rl1Q8K0S5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Rtn4rl1Q8K0S5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn4rl1Q8K0S5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn4rl1Q8K0S5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn4rl1Q8K0S5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Rtn4rl1Q8K0S5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.41■■□□□ 1.02
Rtn4rl1Q8K0S5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn4rl1Q8K0S5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn4rl1Q8K0S5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn4rl1Q8K0S5 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
Rtn4rl1Q8K0S5 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Rtn4rl1Q8K0S5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.41■■□□□ 1.02
Rtn4rl1Q8K0S5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn4rl1Q8K0S5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn4rl1Q8K0S5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn4rl1Q8K0S5 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
Rtn4rl1Q8K0S5 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn4rl1Q8K0S5 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn4rl1Q8K0S5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Rtn4rl1Q8K0S5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Rtn4rl1Q8K0S5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
Rtn4rl1Q8K0S5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.39■■□□□ 1.02
Rtn4rl1Q8K0S5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Rtn4rl1Q8K0S5 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rtn4rl1Q8K0S5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rtn4rl1Q8K0S5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
Rtn4rl1Q8K0S5 Gm7143-201ENSMUST00000222811 859 ntBASIC21.39■■□□□ 1.01
Rtn4rl1Q8K0S5 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rtn4rl1Q8K0S5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Rtn4rl1Q8K0S5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Rtn4rl1Q8K0S5 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Rtn4rl1Q8K0S5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn4rl1Q8K0S5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.38■■□□□ 1.01
Rtn4rl1Q8K0S5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn4rl1Q8K0S5 Gm8493-201ENSMUST00000196881 489 ntBASIC21.38■■□□□ 1.01
Rtn4rl1Q8K0S5 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn4rl1Q8K0S5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn4rl1Q8K0S5 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Rtn4rl1Q8K0S5 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn4rl1Q8K0S5 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn4rl1Q8K0S5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn4rl1Q8K0S5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Rtn4rl1Q8K0S5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
Rtn4rl1Q8K0S5 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rtn4rl1Q8K0S5 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Rtn4rl1Q8K0S5 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.36■■□□□ 1.01
Rtn4rl1Q8K0S5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Rtn4rl1Q8K0S5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Rtn4rl1Q8K0S5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.36■■□□□ 1.01
Rtn4rl1Q8K0S5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Rtn4rl1Q8K0S5 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rtn4rl1Q8K0S5 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rtn4rl1Q8K0S5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Rtn4rl1Q8K0S5 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Rtn4rl1Q8K0S5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Rtn4rl1Q8K0S5 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Rtn4rl1Q8K0S5 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Rtn4rl1Q8K0S5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms