Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3rf2Q8BZT2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3rf2Q8BZT2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3rf2Q8BZT2 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC21.29■■□□□ 1
Sh3rf2Q8BZT2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3rf2Q8BZT2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.29■■□□□ 1
Sh3rf2Q8BZT2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sh3rf2Q8BZT2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3rf2Q8BZT2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sh3rf2Q8BZT2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Sh3rf2Q8BZT2 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Sh3rf2Q8BZT2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
Sh3rf2Q8BZT2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3rf2Q8BZT2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sh3rf2Q8BZT2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3rf2Q8BZT2 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.27■■□□□ 1
Sh3rf2Q8BZT2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sh3rf2Q8BZT2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3rf2Q8BZT2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3rf2Q8BZT2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Sh3rf2Q8BZT2 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.26■□□□□ 0.99
Sh3rf2Q8BZT2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3rf2Q8BZT2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.26■□□□□ 0.99
Sh3rf2Q8BZT2 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sh3rf2Q8BZT2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3rf2Q8BZT2 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3rf2Q8BZT2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3rf2Q8BZT2 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3rf2Q8BZT2 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3rf2Q8BZT2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3rf2Q8BZT2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sh3rf2Q8BZT2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3rf2Q8BZT2 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3rf2Q8BZT2 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.24■□□□□ 0.99
Sh3rf2Q8BZT2 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3rf2Q8BZT2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3rf2Q8BZT2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.24■□□□□ 0.99
Sh3rf2Q8BZT2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.24■□□□□ 0.99
Sh3rf2Q8BZT2 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3rf2Q8BZT2 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Sh3rf2Q8BZT2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sh3rf2Q8BZT2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3rf2Q8BZT2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3rf2Q8BZT2 Gm12821-201ENSMUST00000120022 600 ntBASIC21.23■□□□□ 0.99
Sh3rf2Q8BZT2 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3rf2Q8BZT2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
Sh3rf2Q8BZT2 Gm9870-201ENSMUST00000063874 645 ntBASIC21.23■□□□□ 0.99
Sh3rf2Q8BZT2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sh3rf2Q8BZT2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Sh3rf2Q8BZT2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3rf2Q8BZT2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3rf2Q8BZT2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3rf2Q8BZT2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3rf2Q8BZT2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Sh3rf2Q8BZT2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Sh3rf2Q8BZT2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3rf2Q8BZT2 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3rf2Q8BZT2 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.21■□□□□ 0.99
Sh3rf2Q8BZT2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3rf2Q8BZT2 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3rf2Q8BZT2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3rf2Q8BZT2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3rf2Q8BZT2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3rf2Q8BZT2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.21■□□□□ 0.99
Sh3rf2Q8BZT2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sh3rf2Q8BZT2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.21■□□□□ 0.99
Sh3rf2Q8BZT2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3rf2Q8BZT2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sh3rf2Q8BZT2 Gm27454-201ENSMUST00000185090 204 ntBASIC21.2■□□□□ 0.98
Sh3rf2Q8BZT2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.19■□□□□ 0.98
Sh3rf2Q8BZT2 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Sh3rf2Q8BZT2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3rf2Q8BZT2 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
Sh3rf2Q8BZT2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Sh3rf2Q8BZT2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3rf2Q8BZT2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3rf2Q8BZT2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3rf2Q8BZT2 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3rf2Q8BZT2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sh3rf2Q8BZT2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.18■□□□□ 0.98
Sh3rf2Q8BZT2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3rf2Q8BZT2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3rf2Q8BZT2 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3rf2Q8BZT2 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Sh3rf2Q8BZT2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3rf2Q8BZT2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3rf2Q8BZT2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3rf2Q8BZT2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3rf2Q8BZT2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3rf2Q8BZT2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.17■□□□□ 0.98
Sh3rf2Q8BZT2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3rf2Q8BZT2 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3rf2Q8BZT2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Sh3rf2Q8BZT2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Sh3rf2Q8BZT2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3rf2Q8BZT2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.16■□□□□ 0.98
Sh3rf2Q8BZT2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Sh3rf2Q8BZT2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.16■□□□□ 0.98
Sh3rf2Q8BZT2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.16■□□□□ 0.98
Sh3rf2Q8BZT2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 497.3 ms