Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cpsf7Q8BTV2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cpsf7Q8BTV2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf7Q8BTV2 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cpsf7Q8BTV2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf7Q8BTV2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cpsf7Q8BTV2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf7Q8BTV2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf7Q8BTV2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf7Q8BTV2 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf7Q8BTV2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf7Q8BTV2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf7Q8BTV2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.9■□□□□ 0.94
Cpsf7Q8BTV2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf7Q8BTV2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf7Q8BTV2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cpsf7Q8BTV2 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf7Q8BTV2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf7Q8BTV2 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf7Q8BTV2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cpsf7Q8BTV2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf7Q8BTV2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf7Q8BTV2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf7Q8BTV2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf7Q8BTV2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf7Q8BTV2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
Cpsf7Q8BTV2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf7Q8BTV2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf7Q8BTV2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cpsf7Q8BTV2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf7Q8BTV2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cpsf7Q8BTV2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cpsf7Q8BTV2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf7Q8BTV2 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Cpsf7Q8BTV2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
Cpsf7Q8BTV2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf7Q8BTV2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf7Q8BTV2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf7Q8BTV2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf7Q8BTV2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf7Q8BTV2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf7Q8BTV2 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cpsf7Q8BTV2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf7Q8BTV2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf7Q8BTV2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cpsf7Q8BTV2 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.87■□□□□ 0.93
Cpsf7Q8BTV2 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf7Q8BTV2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf7Q8BTV2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cpsf7Q8BTV2 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.86■□□□□ 0.93
Cpsf7Q8BTV2 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.86■□□□□ 0.93
Cpsf7Q8BTV2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.86■□□□□ 0.93
Cpsf7Q8BTV2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf7Q8BTV2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf7Q8BTV2 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.86■□□□□ 0.93
Cpsf7Q8BTV2 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf7Q8BTV2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf7Q8BTV2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cpsf7Q8BTV2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf7Q8BTV2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf7Q8BTV2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf7Q8BTV2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cpsf7Q8BTV2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 Cap2-205ENSMUST00000225824 1634 ntBASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.85■□□□□ 0.93
Cpsf7Q8BTV2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf7Q8BTV2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf7Q8BTV2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf7Q8BTV2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf7Q8BTV2 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf7Q8BTV2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf7Q8BTV2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf7Q8BTV2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf7Q8BTV2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf7Q8BTV2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.83■□□□□ 0.93
Cpsf7Q8BTV2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf7Q8BTV2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cpsf7Q8BTV2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cpsf7Q8BTV2 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cpsf7Q8BTV2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cpsf7Q8BTV2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.82■□□□□ 0.92
Cpsf7Q8BTV2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cpsf7Q8BTV2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf7Q8BTV2 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf7Q8BTV2 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf7Q8BTV2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf7Q8BTV2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.81■□□□□ 0.92
Cpsf7Q8BTV2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.81■□□□□ 0.92
Cpsf7Q8BTV2 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms