Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
VmacQ8BP01 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.23■■□□□ 1.47
VmacQ8BP01 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
VmacQ8BP01 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.22■■□□□ 1.47
VmacQ8BP01 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.22■■□□□ 1.47
VmacQ8BP01 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
VmacQ8BP01 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.22■■□□□ 1.47
VmacQ8BP01 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
VmacQ8BP01 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
VmacQ8BP01 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.21■■□□□ 1.47
VmacQ8BP01 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
VmacQ8BP01 Gm15820-201ENSMUST00000201566 728 ntBASIC24.21■■□□□ 1.47
VmacQ8BP01 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.21■■□□□ 1.47
VmacQ8BP01 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
VmacQ8BP01 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
VmacQ8BP01 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.21■■□□□ 1.47
VmacQ8BP01 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
VmacQ8BP01 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.2■■□□□ 1.46
VmacQ8BP01 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
VmacQ8BP01 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
VmacQ8BP01 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
VmacQ8BP01 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
VmacQ8BP01 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
VmacQ8BP01 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
VmacQ8BP01 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
VmacQ8BP01 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
VmacQ8BP01 Gm40881-201ENSMUST00000223397 166 ntBASIC24.19■■□□□ 1.46
VmacQ8BP01 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
VmacQ8BP01 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
VmacQ8BP01 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
VmacQ8BP01 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.18■■□□□ 1.46
VmacQ8BP01 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.18■■□□□ 1.46
VmacQ8BP01 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VmacQ8BP01 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
VmacQ8BP01 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.18■■□□□ 1.46
VmacQ8BP01 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VmacQ8BP01 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
VmacQ8BP01 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VmacQ8BP01 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.17■■□□□ 1.46
VmacQ8BP01 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VmacQ8BP01 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VmacQ8BP01 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.16■■□□□ 1.46
VmacQ8BP01 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC24.16■■□□□ 1.46
VmacQ8BP01 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
VmacQ8BP01 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VmacQ8BP01 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VmacQ8BP01 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
VmacQ8BP01 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
VmacQ8BP01 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
VmacQ8BP01 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
VmacQ8BP01 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
VmacQ8BP01 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VmacQ8BP01 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
VmacQ8BP01 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
VmacQ8BP01 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
VmacQ8BP01 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.14■■□□□ 1.45
VmacQ8BP01 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
VmacQ8BP01 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.45
VmacQ8BP01 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
VmacQ8BP01 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
VmacQ8BP01 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
VmacQ8BP01 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.13■■□□□ 1.45
VmacQ8BP01 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
VmacQ8BP01 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
VmacQ8BP01 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
VmacQ8BP01 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
VmacQ8BP01 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC24.12■■□□□ 1.45
VmacQ8BP01 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
VmacQ8BP01 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.11■■□□□ 1.45
VmacQ8BP01 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
VmacQ8BP01 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
VmacQ8BP01 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms