Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
VmacQ8BP01 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
VmacQ8BP01 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC24.23■■□□□ 1.47
VmacQ8BP01 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
VmacQ8BP01 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC24.23■■□□□ 1.47
VmacQ8BP01 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC24.22■■□□□ 1.47
VmacQ8BP01 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 Gm44949-201ENSMUST00000206423 1450 ntBASIC24.22■■□□□ 1.47
VmacQ8BP01 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
VmacQ8BP01 Gm42501-201ENSMUST00000200220 1026 ntBASIC24.22■■□□□ 1.47
VmacQ8BP01 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
VmacQ8BP01 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
VmacQ8BP01 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
VmacQ8BP01 Gm5913-201ENSMUST00000119397 1399 ntBASIC24.21■■□□□ 1.47
VmacQ8BP01 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
VmacQ8BP01 Gm15820-201ENSMUST00000201566 728 ntBASIC24.21■■□□□ 1.47
VmacQ8BP01 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.21■■□□□ 1.47
VmacQ8BP01 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
VmacQ8BP01 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC24.21■■□□□ 1.47
VmacQ8BP01 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.21■■□□□ 1.47
VmacQ8BP01 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
VmacQ8BP01 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC24.2■■□□□ 1.46
VmacQ8BP01 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
VmacQ8BP01 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
VmacQ8BP01 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
VmacQ8BP01 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
VmacQ8BP01 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
VmacQ8BP01 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
VmacQ8BP01 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
VmacQ8BP01 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC24.19■■□□□ 1.46
VmacQ8BP01 Gm40881-201ENSMUST00000223397 166 ntBASIC24.19■■□□□ 1.46
VmacQ8BP01 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
VmacQ8BP01 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
VmacQ8BP01 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
VmacQ8BP01 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.18■■□□□ 1.46
VmacQ8BP01 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.18■■□□□ 1.46
VmacQ8BP01 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
VmacQ8BP01 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
VmacQ8BP01 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC24.18■■□□□ 1.46
VmacQ8BP01 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VmacQ8BP01 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC24.17■■□□□ 1.46
VmacQ8BP01 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
VmacQ8BP01 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC24.17■■□□□ 1.46
VmacQ8BP01 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VmacQ8BP01 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
VmacQ8BP01 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.16■■□□□ 1.46
VmacQ8BP01 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC24.16■■□□□ 1.46
VmacQ8BP01 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
VmacQ8BP01 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
VmacQ8BP01 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VmacQ8BP01 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VmacQ8BP01 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC24.15■■□□□ 1.46
VmacQ8BP01 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
VmacQ8BP01 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
VmacQ8BP01 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
VmacQ8BP01 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
VmacQ8BP01 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
VmacQ8BP01 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.46
VmacQ8BP01 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
VmacQ8BP01 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
VmacQ8BP01 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC24.14■■□□□ 1.45
VmacQ8BP01 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
VmacQ8BP01 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.45
VmacQ8BP01 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
VmacQ8BP01 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
VmacQ8BP01 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
VmacQ8BP01 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.13■■□□□ 1.45
VmacQ8BP01 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
VmacQ8BP01 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
VmacQ8BP01 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
VmacQ8BP01 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
VmacQ8BP01 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC24.12■■□□□ 1.45
VmacQ8BP01 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
VmacQ8BP01 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.11■■□□□ 1.45
VmacQ8BP01 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
VmacQ8BP01 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
VmacQ8BP01 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms