Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.23■□□□□ 0.51
Cdhr3Q8BL00 Notumos-201ENSMUST00000151998 2659 ntBASIC18.23■□□□□ 0.51
Cdhr3Q8BL00 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr3Q8BL00 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr3Q8BL00 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr3Q8BL00 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr3Q8BL00 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr3Q8BL00 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr3Q8BL00 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr3Q8BL00 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr3Q8BL00 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr3Q8BL00 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cdhr3Q8BL00 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Cdhr3Q8BL00 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Cdhr3Q8BL00 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Cdhr3Q8BL00 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cdhr3Q8BL00 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.22■□□□□ 0.51
Cdhr3Q8BL00 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr3Q8BL00 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr3Q8BL00 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr3Q8BL00 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr3Q8BL00 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr3Q8BL00 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr3Q8BL00 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.21■□□□□ 0.51
Cdhr3Q8BL00 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Cdhr3Q8BL00 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Cdhr3Q8BL00 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr3Q8BL00 Gm14523-201ENSMUST00000117260 558 ntBASIC18.2■□□□□ 0.5
Cdhr3Q8BL00 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.2■□□□□ 0.5
Cdhr3Q8BL00 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr3Q8BL00 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cdhr3Q8BL00 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr3Q8BL00 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr3Q8BL00 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr3Q8BL00 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr3Q8BL00 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr3Q8BL00 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr3Q8BL00 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdhr3Q8BL00 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr3Q8BL00 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr3Q8BL00 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr3Q8BL00 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr3Q8BL00 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.19■□□□□ 0.5
Cdhr3Q8BL00 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr3Q8BL00 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr3Q8BL00 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
Cdhr3Q8BL00 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdhr3Q8BL00 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr3Q8BL00 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Cdhr3Q8BL00 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.18■□□□□ 0.5
Cdhr3Q8BL00 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.18■□□□□ 0.5
Cdhr3Q8BL00 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.18■□□□□ 0.5
Cdhr3Q8BL00 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr3Q8BL00 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr3Q8BL00 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr3Q8BL00 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr3Q8BL00 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr3Q8BL00 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdhr3Q8BL00 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cdhr3Q8BL00 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr3Q8BL00 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cdhr3Q8BL00 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr3Q8BL00 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr3Q8BL00 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr3Q8BL00 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr3Q8BL00 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr3Q8BL00 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdhr3Q8BL00 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Cdhr3Q8BL00 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdhr3Q8BL00 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.16■□□□□ 0.5
Cdhr3Q8BL00 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Cdhr3Q8BL00 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.16■□□□□ 0.5
Cdhr3Q8BL00 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdhr3Q8BL00 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr3Q8BL00 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr3Q8BL00 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.15■□□□□ 0.5
Cdhr3Q8BL00 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cdhr3Q8BL00 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Cdhr3Q8BL00 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr3Q8BL00 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr3Q8BL00 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr3Q8BL00 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.15■□□□□ 0.5
Cdhr3Q8BL00 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr3Q8BL00 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr3Q8BL00 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cdhr3Q8BL00 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdhr3Q8BL00 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cdhr3Q8BL00 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cdhr3Q8BL00 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdhr3Q8BL00 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Cdhr3Q8BL00 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.14■□□□□ 0.49
Cdhr3Q8BL00 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cdhr3Q8BL00 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cdhr3Q8BL00 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdhr3Q8BL00 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cdhr3Q8BL00 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 Gm7332-201ENSMUST00000118351 454 ntBASIC18.13■□□□□ 0.49
Cdhr3Q8BL00 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms