Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Nucks1Q80XU3 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.35■■□□□ 1.17
Nucks1Q80XU3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Nucks1Q80XU3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nucks1Q80XU3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nucks1Q80XU3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nucks1Q80XU3 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.34■■□□□ 1.17
Nucks1Q80XU3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nucks1Q80XU3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Nucks1Q80XU3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Nucks1Q80XU3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.33■■□□□ 1.17
Nucks1Q80XU3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Nucks1Q80XU3 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.33■■□□□ 1.17
Nucks1Q80XU3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Nucks1Q80XU3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.16
Nucks1Q80XU3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Nucks1Q80XU3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Nucks1Q80XU3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nucks1Q80XU3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nucks1Q80XU3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nucks1Q80XU3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nucks1Q80XU3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nucks1Q80XU3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nucks1Q80XU3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nucks1Q80XU3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Nucks1Q80XU3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Nucks1Q80XU3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
Nucks1Q80XU3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Nucks1Q80XU3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.31■■□□□ 1.16
Nucks1Q80XU3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.31■■□□□ 1.16
Nucks1Q80XU3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Nucks1Q80XU3 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Nucks1Q80XU3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.3■■□□□ 1.16
Nucks1Q80XU3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nucks1Q80XU3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nucks1Q80XU3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nucks1Q80XU3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Nucks1Q80XU3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.3■■□□□ 1.16
Nucks1Q80XU3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nucks1Q80XU3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Nucks1Q80XU3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nucks1Q80XU3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.29■■□□□ 1.16
Nucks1Q80XU3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nucks1Q80XU3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Nucks1Q80XU3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nucks1Q80XU3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Nucks1Q80XU3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nucks1Q80XU3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.28■■□□□ 1.16
Nucks1Q80XU3 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nucks1Q80XU3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nucks1Q80XU3 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Nucks1Q80XU3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nucks1Q80XU3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Nucks1Q80XU3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nucks1Q80XU3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Nucks1Q80XU3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Nucks1Q80XU3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Nucks1Q80XU3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Nucks1Q80XU3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.27■■□□□ 1.15
Nucks1Q80XU3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nucks1Q80XU3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Nucks1Q80XU3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Nucks1Q80XU3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC22.26■■□□□ 1.15
Nucks1Q80XU3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nucks1Q80XU3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.25■■□□□ 1.15
Nucks1Q80XU3 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.25■■□□□ 1.15
Nucks1Q80XU3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.25■■□□□ 1.15
Nucks1Q80XU3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
Nucks1Q80XU3 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.25■■□□□ 1.15
Nucks1Q80XU3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nucks1Q80XU3 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nucks1Q80XU3 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Nucks1Q80XU3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Nucks1Q80XU3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nucks1Q80XU3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nucks1Q80XU3 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Nucks1Q80XU3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nucks1Q80XU3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nucks1Q80XU3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nucks1Q80XU3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Nucks1Q80XU3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Nucks1Q80XU3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nucks1Q80XU3 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Nucks1Q80XU3 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nucks1Q80XU3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.23■■□□□ 1.15
Nucks1Q80XU3 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Nucks1Q80XU3 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.23■■□□□ 1.15
Nucks1Q80XU3 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nucks1Q80XU3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Nucks1Q80XU3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Nucks1Q80XU3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nucks1Q80XU3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Nucks1Q80XU3 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Nucks1Q80XU3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nucks1Q80XU3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Nucks1Q80XU3 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nucks1Q80XU3 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
Nucks1Q80XU3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Nucks1Q80XU3 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Nucks1Q80XU3 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 153.3 ms