Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Usp6nlQ80XC3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp6nlQ80XC3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Usp6nlQ80XC3 Gm43137-201ENSMUST00000198052 594 ntBASIC23.22■■□□□ 1.31
Usp6nlQ80XC3 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.22■■□□□ 1.31
Usp6nlQ80XC3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Usp6nlQ80XC3 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp6nlQ80XC3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp6nlQ80XC3 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp6nlQ80XC3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp6nlQ80XC3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp6nlQ80XC3 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Usp6nlQ80XC3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Usp6nlQ80XC3 Gm18284-201ENSMUST00000172604 624 ntBASIC23.21■■□□□ 1.31
Usp6nlQ80XC3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.21■■□□□ 1.31
Usp6nlQ80XC3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Usp6nlQ80XC3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Usp6nlQ80XC3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Usp6nlQ80XC3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Usp6nlQ80XC3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.2■■□□□ 1.3
Usp6nlQ80XC3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Usp6nlQ80XC3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Usp6nlQ80XC3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC23.2■■□□□ 1.3
Usp6nlQ80XC3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Usp6nlQ80XC3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Usp6nlQ80XC3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Usp6nlQ80XC3 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.19■■□□□ 1.3
Usp6nlQ80XC3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.19■■□□□ 1.3
Usp6nlQ80XC3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Usp6nlQ80XC3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Usp6nlQ80XC3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Usp6nlQ80XC3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Usp6nlQ80XC3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Usp6nlQ80XC3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Usp6nlQ80XC3 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.18■■□□□ 1.3
Usp6nlQ80XC3 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.18■■□□□ 1.3
Usp6nlQ80XC3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Usp6nlQ80XC3 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Usp6nlQ80XC3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp6nlQ80XC3 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp6nlQ80XC3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp6nlQ80XC3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp6nlQ80XC3 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Usp6nlQ80XC3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.17■■□□□ 1.3
Usp6nlQ80XC3 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Usp6nlQ80XC3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.17■■□□□ 1.3
Usp6nlQ80XC3 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp6nlQ80XC3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Usp6nlQ80XC3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp6nlQ80XC3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.16■■□□□ 1.3
Usp6nlQ80XC3 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
Usp6nlQ80XC3 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Usp6nlQ80XC3 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp6nlQ80XC3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Usp6nlQ80XC3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.15■■□□□ 1.3
Usp6nlQ80XC3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Usp6nlQ80XC3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC23.15■■□□□ 1.3
Usp6nlQ80XC3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Usp6nlQ80XC3 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.15■■□□□ 1.3
Usp6nlQ80XC3 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.15■■□□□ 1.3
Usp6nlQ80XC3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
Usp6nlQ80XC3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
Usp6nlQ80XC3 Mir7075-201ENSMUST00000184187 82 ntBASIC23.15■■□□□ 1.3
Usp6nlQ80XC3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
Usp6nlQ80XC3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Usp6nlQ80XC3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.3
Usp6nlQ80XC3 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Usp6nlQ80XC3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.14■■□□□ 1.3
Usp6nlQ80XC3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Usp6nlQ80XC3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.14■■□□□ 1.29
Usp6nlQ80XC3 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Usp6nlQ80XC3 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Usp6nlQ80XC3 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.14■■□□□ 1.29
Usp6nlQ80XC3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
Usp6nlQ80XC3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Usp6nlQ80XC3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Usp6nlQ80XC3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Usp6nlQ80XC3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Usp6nlQ80XC3 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Usp6nlQ80XC3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Usp6nlQ80XC3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Usp6nlQ80XC3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.13■■□□□ 1.29
Usp6nlQ80XC3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Usp6nlQ80XC3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Usp6nlQ80XC3 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.13■■□□□ 1.29
Usp6nlQ80XC3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Usp6nlQ80XC3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Usp6nlQ80XC3 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp6nlQ80XC3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp6nlQ80XC3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Usp6nlQ80XC3 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Usp6nlQ80XC3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC23.11■■□□□ 1.29
Usp6nlQ80XC3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp6nlQ80XC3 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Usp6nlQ80XC3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Usp6nlQ80XC3 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp6nlQ80XC3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Usp6nlQ80XC3 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
Usp6nlQ80XC3 Gm7143-201ENSMUST00000222811 859 ntBASIC23.11■■□□□ 1.29
Usp6nlQ80XC3 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.11■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms