Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.26■□□□□ 0.67
Pif1Q80SX8 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pif1Q80SX8 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pif1Q80SX8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pif1Q80SX8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pif1Q80SX8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pif1Q80SX8 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Pif1Q80SX8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pif1Q80SX8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pif1Q80SX8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pif1Q80SX8 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.23■□□□□ 0.67
Pif1Q80SX8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pif1Q80SX8 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pif1Q80SX8 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pif1Q80SX8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pif1Q80SX8 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pif1Q80SX8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.21■□□□□ 0.67
Pif1Q80SX8 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.21■□□□□ 0.67
Pif1Q80SX8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pif1Q80SX8 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.2■□□□□ 0.66
Pif1Q80SX8 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pif1Q80SX8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pif1Q80SX8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pif1Q80SX8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.2■□□□□ 0.66
Pif1Q80SX8 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pif1Q80SX8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pif1Q80SX8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Pif1Q80SX8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.18■□□□□ 0.66
Pif1Q80SX8 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pif1Q80SX8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pif1Q80SX8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pif1Q80SX8 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pif1Q80SX8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pif1Q80SX8 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pif1Q80SX8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pif1Q80SX8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pif1Q80SX8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pif1Q80SX8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Pif1Q80SX8 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.16■□□□□ 0.66
Pif1Q80SX8 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pif1Q80SX8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pif1Q80SX8 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.15■□□□□ 0.66
Pif1Q80SX8 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.15■□□□□ 0.66
Pif1Q80SX8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.15■□□□□ 0.66
Pif1Q80SX8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pif1Q80SX8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pif1Q80SX8 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.14■□□□□ 0.65
Pif1Q80SX8 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 151.8 ms