Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cln3Q61124 Gm4430-201ENSMUST00000192413 1943 ntBASIC23.28■■□□□ 1.32
Cln3Q61124 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.28■■□□□ 1.32
Cln3Q61124 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cln3Q61124 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Cln3Q61124 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cln3Q61124 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cln3Q61124 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC23.28■■□□□ 1.32
Cln3Q61124 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Cln3Q61124 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cln3Q61124 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cln3Q61124 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Cln3Q61124 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.27■■□□□ 1.32
Cln3Q61124 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
Cln3Q61124 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Cln3Q61124 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.26■■□□□ 1.31
Cln3Q61124 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cln3Q61124 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Cln3Q61124 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.26■■□□□ 1.31
Cln3Q61124 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Cln3Q61124 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Cln3Q61124 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cln3Q61124 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cln3Q61124 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Cln3Q61124 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.25■■□□□ 1.31
Cln3Q61124 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cln3Q61124 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cln3Q61124 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cln3Q61124 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Cln3Q61124 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
Cln3Q61124 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cln3Q61124 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
Cln3Q61124 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Cln3Q61124 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cln3Q61124 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.23■■□□□ 1.31
Cln3Q61124 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Cln3Q61124 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Cln3Q61124 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC23.23■■□□□ 1.31
Cln3Q61124 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Cln3Q61124 Gm10657-201ENSMUST00000193528 1031 ntBASIC23.23■■□□□ 1.31
Cln3Q61124 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.23■■□□□ 1.31
Cln3Q61124 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Cln3Q61124 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
Cln3Q61124 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.22■■□□□ 1.31
Cln3Q61124 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23.22■■□□□ 1.31
Cln3Q61124 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.22■■□□□ 1.31
Cln3Q61124 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
Cln3Q61124 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Cln3Q61124 Mir7075-201ENSMUST00000184187 82 ntBASIC23.21■■□□□ 1.31
Cln3Q61124 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Cln3Q61124 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Cln3Q61124 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cln3Q61124 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Cln3Q61124 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cln3Q61124 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cln3Q61124 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Cln3Q61124 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Cln3Q61124 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Cln3Q61124 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cln3Q61124 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
Cln3Q61124 Gm18284-201ENSMUST00000172604 624 ntBASIC23.19■■□□□ 1.3
Cln3Q61124 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Cln3Q61124 Gm8495-201ENSMUST00000188740 694 ntBASIC23.19■■□□□ 1.3
Cln3Q61124 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cln3Q61124 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Cln3Q61124 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Cln3Q61124 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Cln3Q61124 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cln3Q61124 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cln3Q61124 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Cln3Q61124 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cln3Q61124 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cln3Q61124 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
Cln3Q61124 Gm43017-201ENSMUST00000198296 752 ntBASIC23.18■■□□□ 1.3
Cln3Q61124 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cln3Q61124 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cln3Q61124 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Cln3Q61124 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Cln3Q61124 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cln3Q61124 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cln3Q61124 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cln3Q61124 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cln3Q61124 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC23.17■■□□□ 1.3
Cln3Q61124 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Cln3Q61124 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.17■■□□□ 1.3
Cln3Q61124 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.17■■□□□ 1.3
Cln3Q61124 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Cln3Q61124 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Cln3Q61124 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.17■■□□□ 1.3
Cln3Q61124 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cln3Q61124 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cln3Q61124 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Cln3Q61124 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.16■■□□□ 1.3
Cln3Q61124 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cln3Q61124 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.16■■□□□ 1.3
Cln3Q61124 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
Cln3Q61124 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cln3Q61124 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Cln3Q61124 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Cln3Q61124 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms