Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
R3hdm4Q4VBF2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.68■■□□□ 1.22
R3hdm4Q4VBF2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.68■■□□□ 1.22
R3hdm4Q4VBF2 Gm40881-201ENSMUST00000223397 166 ntBASIC22.68■■□□□ 1.22
R3hdm4Q4VBF2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
R3hdm4Q4VBF2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
R3hdm4Q4VBF2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
R3hdm4Q4VBF2 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
R3hdm4Q4VBF2 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
R3hdm4Q4VBF2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
R3hdm4Q4VBF2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.67■■□□□ 1.22
R3hdm4Q4VBF2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
R3hdm4Q4VBF2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
R3hdm4Q4VBF2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
R3hdm4Q4VBF2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
R3hdm4Q4VBF2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3hdm4Q4VBF2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3hdm4Q4VBF2 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3hdm4Q4VBF2 Gm14117-201ENSMUST00000122417 843 ntBASIC22.66■■□□□ 1.22
R3hdm4Q4VBF2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3hdm4Q4VBF2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.66■■□□□ 1.22
R3hdm4Q4VBF2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC22.66■■□□□ 1.22
R3hdm4Q4VBF2 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3hdm4Q4VBF2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
R3hdm4Q4VBF2 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.66■■□□□ 1.22
R3hdm4Q4VBF2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
R3hdm4Q4VBF2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
R3hdm4Q4VBF2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
R3hdm4Q4VBF2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.64■■□□□ 1.21
R3hdm4Q4VBF2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.64■■□□□ 1.21
R3hdm4Q4VBF2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
R3hdm4Q4VBF2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
R3hdm4Q4VBF2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
R3hdm4Q4VBF2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.64■■□□□ 1.21
R3hdm4Q4VBF2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
R3hdm4Q4VBF2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
R3hdm4Q4VBF2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
R3hdm4Q4VBF2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
R3hdm4Q4VBF2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
R3hdm4Q4VBF2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
R3hdm4Q4VBF2 Etf1-202ENSMUST00000180351 108 ntBASIC22.63■■□□□ 1.21
R3hdm4Q4VBF2 Gm45102-201ENSMUST00000207427 857 ntBASIC22.63■■□□□ 1.21
R3hdm4Q4VBF2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
R3hdm4Q4VBF2 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
R3hdm4Q4VBF2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
R3hdm4Q4VBF2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
R3hdm4Q4VBF2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
R3hdm4Q4VBF2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
R3hdm4Q4VBF2 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
R3hdm4Q4VBF2 Rps24-207ENSMUST00000224568 714 ntBASIC22.62■■□□□ 1.21
R3hdm4Q4VBF2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
R3hdm4Q4VBF2 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
R3hdm4Q4VBF2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
R3hdm4Q4VBF2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
R3hdm4Q4VBF2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
R3hdm4Q4VBF2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC22.61■■□□□ 1.21
R3hdm4Q4VBF2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.61■■□□□ 1.21
R3hdm4Q4VBF2 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
R3hdm4Q4VBF2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
R3hdm4Q4VBF2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
R3hdm4Q4VBF2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
R3hdm4Q4VBF2 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
R3hdm4Q4VBF2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
R3hdm4Q4VBF2 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
R3hdm4Q4VBF2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
R3hdm4Q4VBF2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
R3hdm4Q4VBF2 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
R3hdm4Q4VBF2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
R3hdm4Q4VBF2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.59■■□□□ 1.21
R3hdm4Q4VBF2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
R3hdm4Q4VBF2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
R3hdm4Q4VBF2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
R3hdm4Q4VBF2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
R3hdm4Q4VBF2 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
R3hdm4Q4VBF2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
R3hdm4Q4VBF2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
R3hdm4Q4VBF2 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
R3hdm4Q4VBF2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
R3hdm4Q4VBF2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC22.58■■□□□ 1.21
R3hdm4Q4VBF2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
R3hdm4Q4VBF2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
R3hdm4Q4VBF2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
R3hdm4Q4VBF2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC22.57■■□□□ 1.2
R3hdm4Q4VBF2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC22.57■■□□□ 1.2
R3hdm4Q4VBF2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
R3hdm4Q4VBF2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
R3hdm4Q4VBF2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
R3hdm4Q4VBF2 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC22.56■■□□□ 1.2
R3hdm4Q4VBF2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
R3hdm4Q4VBF2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
R3hdm4Q4VBF2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.56■■□□□ 1.2
R3hdm4Q4VBF2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
R3hdm4Q4VBF2 Gm7417-201ENSMUST00000192950 473 ntBASIC22.55■■□□□ 1.2
R3hdm4Q4VBF2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
R3hdm4Q4VBF2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
R3hdm4Q4VBF2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.55■■□□□ 1.2
R3hdm4Q4VBF2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
R3hdm4Q4VBF2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
R3hdm4Q4VBF2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.54■■□□□ 1.2
R3hdm4Q4VBF2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms