Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.31■■□□□ 1
Fam196aQ3USH1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam196aQ3USH1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.3■■□□□ 1
Fam196aQ3USH1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.3■■□□□ 1
Fam196aQ3USH1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.3■■□□□ 1
Fam196aQ3USH1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.3■■□□□ 1
Fam196aQ3USH1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam196aQ3USH1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fam196aQ3USH1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam196aQ3USH1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam196aQ3USH1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Fam196aQ3USH1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam196aQ3USH1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.29■■□□□ 1
Fam196aQ3USH1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.29■■□□□ 1
Fam196aQ3USH1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.29■■□□□ 1
Fam196aQ3USH1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam196aQ3USH1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Fam196aQ3USH1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.29■■□□□ 1
Fam196aQ3USH1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.29■■□□□ 1
Fam196aQ3USH1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam196aQ3USH1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam196aQ3USH1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.28■■□□□ 1
Fam196aQ3USH1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.28■■□□□ 1
Fam196aQ3USH1 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.28■■□□□ 1
Fam196aQ3USH1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.28■■□□□ 1
Fam196aQ3USH1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam196aQ3USH1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.28■■□□□ 1
Fam196aQ3USH1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Fam196aQ3USH1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam196aQ3USH1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Fam196aQ3USH1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam196aQ3USH1 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.27■■□□□ 1
Fam196aQ3USH1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam196aQ3USH1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam196aQ3USH1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.27■■□□□ 1
Fam196aQ3USH1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam196aQ3USH1 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Fam196aQ3USH1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Fam196aQ3USH1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam196aQ3USH1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Fam196aQ3USH1 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam196aQ3USH1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam196aQ3USH1 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.25■□□□□ 0.99
Fam196aQ3USH1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam196aQ3USH1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam196aQ3USH1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Fam196aQ3USH1 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.25■□□□□ 0.99
Fam196aQ3USH1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam196aQ3USH1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Fam196aQ3USH1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.24■□□□□ 0.99
Fam196aQ3USH1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Fam196aQ3USH1 Gm18671-201ENSMUST00000214826 683 ntBASIC21.24■□□□□ 0.99
Fam196aQ3USH1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fam196aQ3USH1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fam196aQ3USH1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Fam196aQ3USH1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Fam196aQ3USH1 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.23■□□□□ 0.99
Fam196aQ3USH1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Fam196aQ3USH1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.23■□□□□ 0.99
Fam196aQ3USH1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Fam196aQ3USH1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.23■□□□□ 0.99
Fam196aQ3USH1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fam196aQ3USH1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Fam196aQ3USH1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.22■□□□□ 0.99
Fam196aQ3USH1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fam196aQ3USH1 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fam196aQ3USH1 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fam196aQ3USH1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Fam196aQ3USH1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fam196aQ3USH1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fam196aQ3USH1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fam196aQ3USH1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fam196aQ3USH1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Fam196aQ3USH1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fam196aQ3USH1 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.2■□□□□ 0.98
Fam196aQ3USH1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fam196aQ3USH1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fam196aQ3USH1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Fam196aQ3USH1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
Fam196aQ3USH1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Fam196aQ3USH1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.2■□□□□ 0.98
Fam196aQ3USH1 Spcs1-204ENSMUST00000226782 949 ntBASIC21.2■□□□□ 0.98
Fam196aQ3USH1 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fam196aQ3USH1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Fam196aQ3USH1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fam196aQ3USH1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Fam196aQ3USH1 Gm40848-201ENSMUST00000221998 324 ntBASIC21.19■□□□□ 0.98
Fam196aQ3USH1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Fam196aQ3USH1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Fam196aQ3USH1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fam196aQ3USH1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
Fam196aQ3USH1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Fam196aQ3USH1 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Fam196aQ3USH1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Fam196aQ3USH1 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Fam196aQ3USH1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.18■□□□□ 0.98
Fam196aQ3USH1 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Fam196aQ3USH1 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Fam196aQ3USH1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Fam196aQ3USH1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms