Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx3-2P97503 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx3-2P97503 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Nkx3-2P97503 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.69■□□□□ 0.74
Nkx3-2P97503 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx3-2P97503 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx3-2P97503 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx3-2P97503 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nkx3-2P97503 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx3-2P97503 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx3-2P97503 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx3-2P97503 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx3-2P97503 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx3-2P97503 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nkx3-2P97503 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx3-2P97503 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.67■□□□□ 0.74
Nkx3-2P97503 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx3-2P97503 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nkx3-2P97503 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx3-2P97503 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nkx3-2P97503 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.67■□□□□ 0.74
Nkx3-2P97503 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nkx3-2P97503 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx3-2P97503 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nkx3-2P97503 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Nkx3-2P97503 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nkx3-2P97503 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Nkx3-2P97503 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx3-2P97503 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.66■□□□□ 0.74
Nkx3-2P97503 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx3-2P97503 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx3-2P97503 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx3-2P97503 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx3-2P97503 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx3-2P97503 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nkx3-2P97503 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx3-2P97503 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nkx3-2P97503 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nkx3-2P97503 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx3-2P97503 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.65■□□□□ 0.74
Nkx3-2P97503 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Nkx3-2P97503 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nkx3-2P97503 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.64■□□□□ 0.73
Nkx3-2P97503 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx3-2P97503 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nkx3-2P97503 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Nkx3-2P97503 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx3-2P97503 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Nkx3-2P97503 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx3-2P97503 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx3-2P97503 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx3-2P97503 Gm15039-201ENSMUST00000118914 875 ntBASIC19.63■□□□□ 0.73
Nkx3-2P97503 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.63■□□□□ 0.73
Nkx3-2P97503 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx3-2P97503 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkx3-2P97503 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.63■□□□□ 0.73
Nkx3-2P97503 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx3-2P97503 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx3-2P97503 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.62■□□□□ 0.73
Nkx3-2P97503 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkx3-2P97503 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.61■□□□□ 0.73
Nkx3-2P97503 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx3-2P97503 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
Nkx3-2P97503 Gm12922-201ENSMUST00000120626 809 ntBASIC19.61■□□□□ 0.73
Nkx3-2P97503 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx3-2P97503 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx3-2P97503 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.61■□□□□ 0.73
Nkx3-2P97503 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx3-2P97503 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkx3-2P97503 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx3-2P97503 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx3-2P97503 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx3-2P97503 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx3-2P97503 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx3-2P97503 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nkx3-2P97503 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx3-2P97503 Gm13241-201ENSMUST00000094493 780 ntBASIC19.6■□□□□ 0.73
Nkx3-2P97503 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx3-2P97503 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx3-2P97503 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkx3-2P97503 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Nkx3-2P97503 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx3-2P97503 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkx3-2P97503 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Nkx3-2P97503 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Nkx3-2P97503 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nkx3-2P97503 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx3-2P97503 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Nkx3-2P97503 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Nkx3-2P97503 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.58■□□□□ 0.72
Nkx3-2P97503 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx3-2P97503 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx3-2P97503 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.58■□□□□ 0.72
Nkx3-2P97503 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx3-2P97503 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx3-2P97503 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx3-2P97503 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx3-2P97503 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.57■□□□□ 0.72
Nkx3-2P97503 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx3-2P97503 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms