Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1aP97445 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cacna1aP97445 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1aP97445 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1aP97445 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1aP97445 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1aP97445 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cacna1aP97445 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1aP97445 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1aP97445 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
Cacna1aP97445 Gm43173-201ENSMUST00000202246 593 ntBASIC19.42■□□□□ 0.7
Cacna1aP97445 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.42■□□□□ 0.7
Cacna1aP97445 Spcs1-204ENSMUST00000226782 949 ntBASIC19.42■□□□□ 0.7
Cacna1aP97445 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1aP97445 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1aP97445 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Cacna1aP97445 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1aP97445 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.41■□□□□ 0.7
Cacna1aP97445 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.41■□□□□ 0.7
Cacna1aP97445 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1aP97445 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1aP97445 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1aP97445 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1aP97445 Mir7075-201ENSMUST00000184187 82 ntBASIC19.41■□□□□ 0.7
Cacna1aP97445 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1aP97445 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.4■□□□□ 0.7
Cacna1aP97445 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.4■□□□□ 0.7
Cacna1aP97445 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1aP97445 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1aP97445 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1aP97445 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cacna1aP97445 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1aP97445 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.39■□□□□ 0.69
Cacna1aP97445 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1aP97445 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1aP97445 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1aP97445 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1aP97445 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1aP97445 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1aP97445 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1aP97445 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1aP97445 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1aP97445 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cacna1aP97445 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1aP97445 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1aP97445 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
Cacna1aP97445 Gm43017-201ENSMUST00000198296 752 ntBASIC19.37■□□□□ 0.69
Cacna1aP97445 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.37■□□□□ 0.69
Cacna1aP97445 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1aP97445 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1aP97445 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.37■□□□□ 0.69
Cacna1aP97445 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1aP97445 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.36■□□□□ 0.69
Cacna1aP97445 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1aP97445 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1aP97445 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacna1aP97445 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.36■□□□□ 0.69
Cacna1aP97445 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1aP97445 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.35■□□□□ 0.69
Cacna1aP97445 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cacna1aP97445 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1aP97445 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1aP97445 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.35■□□□□ 0.69
Cacna1aP97445 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1aP97445 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1aP97445 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Cacna1aP97445 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.34■□□□□ 0.69
Cacna1aP97445 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1aP97445 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1aP97445 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1aP97445 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1aP97445 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.34■□□□□ 0.69
Cacna1aP97445 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Cacna1aP97445 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1aP97445 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.34■□□□□ 0.69
Cacna1aP97445 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1aP97445 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Cacna1aP97445 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.34■□□□□ 0.69
Cacna1aP97445 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1aP97445 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Cacna1aP97445 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.33■□□□□ 0.69
Cacna1aP97445 Gm10849-201ENSMUST00000100397 618 ntBASIC19.33■□□□□ 0.69
Cacna1aP97445 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.33■□□□□ 0.69
Cacna1aP97445 Wdr70-203ENSMUST00000227371 1130 ntBASIC19.33■□□□□ 0.69
Cacna1aP97445 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1aP97445 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1aP97445 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1aP97445 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cacna1aP97445 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1aP97445 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.32■□□□□ 0.68
Cacna1aP97445 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1aP97445 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.32■□□□□ 0.68
Cacna1aP97445 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1aP97445 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.32■□□□□ 0.68
Cacna1aP97445 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.32■□□□□ 0.68
Cacna1aP97445 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1aP97445 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.31■□□□□ 0.68
Cacna1aP97445 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1aP97445 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1aP97445 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms