Protein–RNA interactions for Protein: P70407

Cdh9, Cadherin-9, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh9P70407 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh9P70407 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh9P70407 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh9P70407 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.69■■□□□ 1.06
Cdh9P70407 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh9P70407 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh9P70407 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.68■■□□□ 1.06
Cdh9P70407 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh9P70407 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.68■■□□□ 1.06
Cdh9P70407 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh9P70407 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh9P70407 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh9P70407 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.68■■□□□ 1.06
Cdh9P70407 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh9P70407 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh9P70407 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh9P70407 Gm22238-201ENSMUST00000175222 88 ntBASIC21.67■■□□□ 1.06
Cdh9P70407 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh9P70407 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
Cdh9P70407 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.67■■□□□ 1.06
Cdh9P70407 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh9P70407 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cdh9P70407 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.66■■□□□ 1.06
Cdh9P70407 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.66■■□□□ 1.06
Cdh9P70407 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh9P70407 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Cdh9P70407 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Cdh9P70407 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh9P70407 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh9P70407 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh9P70407 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh9P70407 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Cdh9P70407 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh9P70407 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Cdh9P70407 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.65■■□□□ 1.06
Cdh9P70407 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.65■■□□□ 1.06
Cdh9P70407 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh9P70407 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh9P70407 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh9P70407 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh9P70407 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh9P70407 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdh9P70407 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdh9P70407 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Cdh9P70407 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Cdh9P70407 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.64■■□□□ 1.06
Cdh9P70407 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.64■■□□□ 1.06
Cdh9P70407 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh9P70407 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Cdh9P70407 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh9P70407 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh9P70407 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh9P70407 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh9P70407 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh9P70407 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.63■■□□□ 1.05
Cdh9P70407 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh9P70407 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Cdh9P70407 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Cdh9P70407 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh9P70407 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh9P70407 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh9P70407 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.62■■□□□ 1.05
Cdh9P70407 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.62■■□□□ 1.05
Cdh9P70407 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Cdh9P70407 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh9P70407 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh9P70407 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh9P70407 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh9P70407 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh9P70407 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh9P70407 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.61■■□□□ 1.05
Cdh9P70407 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh9P70407 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh9P70407 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh9P70407 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh9P70407 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh9P70407 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh9P70407 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh9P70407 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh9P70407 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh9P70407 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh9P70407 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh9P70407 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh9P70407 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh9P70407 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdh9P70407 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
Cdh9P70407 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh9P70407 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh9P70407 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh9P70407 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
Cdh9P70407 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh9P70407 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh9P70407 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Cdh9P70407 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh9P70407 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Cdh9P70407 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.56■■□□□ 1.04
Cdh9P70407 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.56■■□□□ 1.04
Cdh9P70407 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Cdh9P70407 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.56■■□□□ 1.04
Cdh9P70407 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms