Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Six5P70178 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six5P70178 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six5P70178 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six5P70178 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six5P70178 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Six5P70178 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Six5P70178 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six5P70178 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six5P70178 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.57■□□□□ 0.72
Six5P70178 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six5P70178 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Six5P70178 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Six5P70178 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six5P70178 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six5P70178 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Six5P70178 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Six5P70178 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six5P70178 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.56■□□□□ 0.72
Six5P70178 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six5P70178 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Six5P70178 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Six5P70178 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six5P70178 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Six5P70178 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Six5P70178 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.55■□□□□ 0.72
Six5P70178 Gm10399-202ENSMUST00000202768 748 ntBASIC19.55■□□□□ 0.72
Six5P70178 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Six5P70178 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.55■□□□□ 0.72
Six5P70178 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six5P70178 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six5P70178 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six5P70178 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Six5P70178 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six5P70178 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Six5P70178 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six5P70178 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six5P70178 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six5P70178 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.54■□□□□ 0.72
Six5P70178 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six5P70178 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six5P70178 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Six5P70178 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six5P70178 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six5P70178 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six5P70178 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six5P70178 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six5P70178 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.53■□□□□ 0.72
Six5P70178 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six5P70178 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Six5P70178 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Six5P70178 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Six5P70178 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
Six5P70178 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Six5P70178 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Six5P70178 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Six5P70178 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Six5P70178 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Six5P70178 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six5P70178 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six5P70178 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six5P70178 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.51■□□□□ 0.71
Six5P70178 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.51■□□□□ 0.71
Six5P70178 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.51■□□□□ 0.71
Six5P70178 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.51■□□□□ 0.71
Six5P70178 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six5P70178 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Six5P70178 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.51■□□□□ 0.71
Six5P70178 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Six5P70178 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Six5P70178 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six5P70178 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Six5P70178 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Six5P70178 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six5P70178 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Six5P70178 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Six5P70178 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Six5P70178 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.48■□□□□ 0.71
Six5P70178 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six5P70178 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Six5P70178 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.48■□□□□ 0.71
Six5P70178 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six5P70178 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six5P70178 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.48■□□□□ 0.71
Six5P70178 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six5P70178 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Six5P70178 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Six5P70178 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
Six5P70178 Gm15546-201ENSMUST00000122095 826 ntBASIC19.47■□□□□ 0.71
Six5P70178 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.47■□□□□ 0.71
Six5P70178 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.47■□□□□ 0.71
Six5P70178 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Six5P70178 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Six5P70178 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Six5P70178 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.46■□□□□ 0.71
Six5P70178 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.46■□□□□ 0.71
Six5P70178 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six5P70178 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six5P70178 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Six5P70178 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms