Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.34■■□□□ 1.01
Tubgcp3P58854 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Tubgcp3P58854 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp3P58854 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Tubgcp3P58854 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.34■■□□□ 1.01
Tubgcp3P58854 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Tubgcp3P58854 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp3P58854 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tubgcp3P58854 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Tubgcp3P58854 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp3P58854 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp3P58854 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp3P58854 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Tubgcp3P58854 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.33■■□□□ 1.01
Tubgcp3P58854 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
Tubgcp3P58854 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Tubgcp3P58854 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.33■■□□□ 1
Tubgcp3P58854 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Tubgcp3P58854 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.32■■□□□ 1
Tubgcp3P58854 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tubgcp3P58854 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC21.32■■□□□ 1
Tubgcp3P58854 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Tubgcp3P58854 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tubgcp3P58854 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Tubgcp3P58854 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.32■■□□□ 1
Tubgcp3P58854 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Tubgcp3P58854 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp3P58854 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp3P58854 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp3P58854 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.31■■□□□ 1
Tubgcp3P58854 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp3P58854 Gm45444-201ENSMUST00000211394 898 ntBASIC21.31■■□□□ 1
Tubgcp3P58854 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.31■■□□□ 1
Tubgcp3P58854 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.31■■□□□ 1
Tubgcp3P58854 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
Tubgcp3P58854 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp3P58854 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp3P58854 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Tubgcp3P58854 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.3■■□□□ 1
Tubgcp3P58854 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC21.3■■□□□ 1
Tubgcp3P58854 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
Tubgcp3P58854 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tubgcp3P58854 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tubgcp3P58854 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.29■■□□□ 1
Tubgcp3P58854 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Tubgcp3P58854 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.29■■□□□ 1
Tubgcp3P58854 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Tubgcp3P58854 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Tubgcp3P58854 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tubgcp3P58854 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tubgcp3P58854 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tubgcp3P58854 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tubgcp3P58854 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tubgcp3P58854 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.28■■□□□ 1
Tubgcp3P58854 Gm5921-201ENSMUST00000075898 882 ntBASIC21.28■■□□□ 1
Tubgcp3P58854 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tubgcp3P58854 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.28■■□□□ 1
Tubgcp3P58854 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tubgcp3P58854 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
Tubgcp3P58854 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tubgcp3P58854 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Tubgcp3P58854 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.27■■□□□ 1
Tubgcp3P58854 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.27■■□□□ 1
Tubgcp3P58854 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tubgcp3P58854 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Tubgcp3P58854 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Tubgcp3P58854 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Tubgcp3P58854 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.26■□□□□ 0.99
Tubgcp3P58854 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Tubgcp3P58854 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tubgcp3P58854 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tubgcp3P58854 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tubgcp3P58854 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
Tubgcp3P58854 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tubgcp3P58854 Gm13238-201ENSMUST00000117655 780 ntBASIC21.25■□□□□ 0.99
Tubgcp3P58854 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tubgcp3P58854 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Tubgcp3P58854 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.25■□□□□ 0.99
Tubgcp3P58854 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tubgcp3P58854 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Tubgcp3P58854 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Tubgcp3P58854 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tubgcp3P58854 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tubgcp3P58854 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tubgcp3P58854 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tubgcp3P58854 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
Tubgcp3P58854 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Tubgcp3P58854 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Tubgcp3P58854 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tubgcp3P58854 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tubgcp3P58854 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tubgcp3P58854 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Tubgcp3P58854 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tubgcp3P58854 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.21■□□□□ 0.99
Tubgcp3P58854 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Tubgcp3P58854 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tubgcp3P58854 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.21■□□□□ 0.99
Tubgcp3P58854 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC21.21■□□□□ 0.99
Tubgcp3P58854 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tubgcp3P58854 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms