Protein–RNA interactions for Protein: P56280

Tcl1a, T-cell leukemia/lymphoma protein 1A, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcl1aP56280 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcl1aP56280 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcl1aP56280 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tcl1aP56280 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tcl1aP56280 Etf1-202ENSMUST00000180351 108 ntBASIC18.79■□□□□ 0.6
Tcl1aP56280 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcl1aP56280 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcl1aP56280 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcl1aP56280 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcl1aP56280 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tcl1aP56280 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tcl1aP56280 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tcl1aP56280 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.78■□□□□ 0.6
Tcl1aP56280 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Tcl1aP56280 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcl1aP56280 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcl1aP56280 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Tcl1aP56280 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.78■□□□□ 0.6
Tcl1aP56280 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tcl1aP56280 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tcl1aP56280 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tcl1aP56280 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcl1aP56280 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcl1aP56280 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcl1aP56280 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tcl1aP56280 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.59
Tcl1aP56280 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
Tcl1aP56280 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcl1aP56280 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Tcl1aP56280 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcl1aP56280 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcl1aP56280 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.76■□□□□ 0.59
Tcl1aP56280 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcl1aP56280 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcl1aP56280 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcl1aP56280 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tcl1aP56280 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tcl1aP56280 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tcl1aP56280 Gm14117-201ENSMUST00000122417 843 ntBASIC18.75■□□□□ 0.59
Tcl1aP56280 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Tcl1aP56280 Gm45102-201ENSMUST00000207427 857 ntBASIC18.75■□□□□ 0.59
Tcl1aP56280 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tcl1aP56280 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
Tcl1aP56280 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcl1aP56280 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.74■□□□□ 0.59
Tcl1aP56280 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcl1aP56280 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcl1aP56280 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcl1aP56280 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcl1aP56280 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.74■□□□□ 0.59
Tcl1aP56280 Gm7417-201ENSMUST00000192950 473 ntBASIC18.74■□□□□ 0.59
Tcl1aP56280 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.74■□□□□ 0.59
Tcl1aP56280 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tcl1aP56280 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcl1aP56280 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.73■□□□□ 0.59
Tcl1aP56280 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcl1aP56280 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcl1aP56280 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcl1aP56280 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Tcl1aP56280 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcl1aP56280 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcl1aP56280 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tcl1aP56280 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tcl1aP56280 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcl1aP56280 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcl1aP56280 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.72■□□□□ 0.59
Tcl1aP56280 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcl1aP56280 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Tcl1aP56280 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcl1aP56280 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tcl1aP56280 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tcl1aP56280 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.71■□□□□ 0.59
Tcl1aP56280 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tcl1aP56280 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.71■□□□□ 0.59
Tcl1aP56280 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.7■□□□□ 0.58
Tcl1aP56280 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tcl1aP56280 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tcl1aP56280 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tcl1aP56280 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tcl1aP56280 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.7■□□□□ 0.58
Tcl1aP56280 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tcl1aP56280 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tcl1aP56280 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tcl1aP56280 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Tcl1aP56280 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tcl1aP56280 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcl1aP56280 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tcl1aP56280 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcl1aP56280 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcl1aP56280 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tcl1aP56280 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcl1aP56280 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcl1aP56280 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tcl1aP56280 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcl1aP56280 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.68■□□□□ 0.58
Tcl1aP56280 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.68■□□□□ 0.58
Tcl1aP56280 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.68■□□□□ 0.58
Tcl1aP56280 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Tcl1aP56280 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tcl1aP56280 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms