Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Srp9P49962 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.63■□□□□ 0.41
Srp9P49962 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srp9P49962 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.62■□□□□ 0.41
Srp9P49962 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srp9P49962 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srp9P49962 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srp9P49962 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Srp9P49962 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
Srp9P49962 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Srp9P49962 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srp9P49962 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Srp9P49962 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Srp9P49962 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp9P49962 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Srp9P49962 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp9P49962 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Srp9P49962 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp9P49962 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Srp9P49962 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp9P49962 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Srp9P49962 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp9P49962 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Srp9P49962 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp9P49962 Iqck-206ENSMUST00000208658 2891 ntBASIC17.6■□□□□ 0.41
Srp9P49962 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Srp9P49962 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp9P49962 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.59■□□□□ 0.41
Srp9P49962 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Srp9P49962 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp9P49962 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp9P49962 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC17.59■□□□□ 0.41
Srp9P49962 Gm12366-201ENSMUST00000121722 873 ntBASIC17.59■□□□□ 0.41
Srp9P49962 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC17.59■□□□□ 0.41
Srp9P49962 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Srp9P49962 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC17.59■□□□□ 0.41
Srp9P49962 Gm5786-201ENSMUST00000085368 882 ntBASIC17.59■□□□□ 0.41
Srp9P49962 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Srp9P49962 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Srp9P49962 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Srp9P49962 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Srp9P49962 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Srp9P49962 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Srp9P49962 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Srp9P49962 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Srp9P49962 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srp9P49962 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.58■□□□□ 0.4
Srp9P49962 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.58■□□□□ 0.4
Srp9P49962 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srp9P49962 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srp9P49962 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Srp9P49962 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Srp9P49962 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srp9P49962 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srp9P49962 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srp9P49962 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Srp9P49962 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.57■□□□□ 0.4
Srp9P49962 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Srp9P49962 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Srp9P49962 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Srp9P49962 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Srp9P49962 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp9P49962 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Srp9P49962 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp9P49962 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.56■□□□□ 0.4
Srp9P49962 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.56■□□□□ 0.4
Srp9P49962 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Srp9P49962 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp9P49962 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Srp9P49962 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Srp9P49962 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp9P49962 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Srp9P49962 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Srp9P49962 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp9P49962 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
Srp9P49962 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp9P49962 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp9P49962 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp9P49962 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Srp9P49962 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp9P49962 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp9P49962 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp9P49962 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Srp9P49962 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Srp9P49962 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srp9P49962 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srp9P49962 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srp9P49962 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srp9P49962 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Srp9P49962 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srp9P49962 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srp9P49962 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srp9P49962 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Srp9P49962 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srp9P49962 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srp9P49962 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Srp9P49962 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Srp9P49962 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.53■□□□□ 0.4
Srp9P49962 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Srp9P49962 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms