Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.48■□□□□ 0.71
Sox6P40645 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sox6P40645 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Sox6P40645 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sox6P40645 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox6P40645 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sox6P40645 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox6P40645 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox6P40645 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox6P40645 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox6P40645 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sox6P40645 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sox6P40645 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sox6P40645 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox6P40645 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sox6P40645 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox6P40645 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox6P40645 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox6P40645 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Sox6P40645 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sox6P40645 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Sox6P40645 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox6P40645 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sox6P40645 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.45■□□□□ 0.7
Sox6P40645 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox6P40645 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.45■□□□□ 0.7
Sox6P40645 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sox6P40645 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.45■□□□□ 0.7
Sox6P40645 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.45■□□□□ 0.7
Sox6P40645 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sox6P40645 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.45■□□□□ 0.7
Sox6P40645 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox6P40645 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox6P40645 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox6P40645 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sox6P40645 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Sox6P40645 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Sox6P40645 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox6P40645 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sox6P40645 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.43■□□□□ 0.7
Sox6P40645 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox6P40645 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox6P40645 Gm22567-201ENSMUST00000175542 342 ntBASIC19.43■□□□□ 0.7
Sox6P40645 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox6P40645 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox6P40645 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sox6P40645 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sox6P40645 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.42■□□□□ 0.7
Sox6P40645 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox6P40645 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sox6P40645 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox6P40645 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox6P40645 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox6P40645 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox6P40645 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sox6P40645 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox6P40645 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sox6P40645 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox6P40645 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox6P40645 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox6P40645 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox6P40645 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Sox6P40645 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox6P40645 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.4■□□□□ 0.7
Sox6P40645 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Sox6P40645 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox6P40645 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox6P40645 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox6P40645 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sox6P40645 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox6P40645 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox6P40645 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox6P40645 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sox6P40645 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sox6P40645 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.38■□□□□ 0.69
Sox6P40645 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sox6P40645 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.38■□□□□ 0.69
Sox6P40645 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.38■□□□□ 0.69
Sox6P40645 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox6P40645 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox6P40645 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox6P40645 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox6P40645 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox6P40645 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.37■□□□□ 0.69
Sox6P40645 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox6P40645 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sox6P40645 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox6P40645 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox6P40645 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox6P40645 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sox6P40645 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox6P40645 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox6P40645 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Sox6P40645 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.36■□□□□ 0.69
Sox6P40645 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox6P40645 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox6P40645 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox6P40645 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sox6P40645 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox6P40645 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms