Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh4P39038 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh4P39038 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.01■□□□□ 0.79
Cdh4P39038 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh4P39038 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh4P39038 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh4P39038 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh4P39038 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cdh4P39038 Gm5131-201ENSMUST00000212776 1238 ntBASIC20■□□□□ 0.79
Cdh4P39038 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh4P39038 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cdh4P39038 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh4P39038 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh4P39038 Rps24-207ENSMUST00000224568 714 ntBASIC19.98■□□□□ 0.79
Cdh4P39038 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cdh4P39038 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh4P39038 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh4P39038 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Cdh4P39038 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh4P39038 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh4P39038 Gm9959-201ENSMUST00000068277 390 ntBASIC19.97■□□□□ 0.79
Cdh4P39038 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Cdh4P39038 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cdh4P39038 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh4P39038 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh4P39038 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh4P39038 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh4P39038 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh4P39038 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Cdh4P39038 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.96■□□□□ 0.79
Cdh4P39038 Etf1-202ENSMUST00000180351 108 ntBASIC19.96■□□□□ 0.79
Cdh4P39038 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.96■□□□□ 0.79
Cdh4P39038 Gm40881-201ENSMUST00000223397 166 ntBASIC19.96■□□□□ 0.79
Cdh4P39038 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh4P39038 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cdh4P39038 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Cdh4P39038 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh4P39038 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh4P39038 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cdh4P39038 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh4P39038 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Cdh4P39038 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cdh4P39038 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.95■□□□□ 0.78
Cdh4P39038 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh4P39038 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.95■□□□□ 0.78
Cdh4P39038 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.95■□□□□ 0.78
Cdh4P39038 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cdh4P39038 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.95■□□□□ 0.78
Cdh4P39038 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Cdh4P39038 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh4P39038 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh4P39038 Gm45102-201ENSMUST00000207427 857 ntBASIC19.94■□□□□ 0.78
Cdh4P39038 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.94■□□□□ 0.78
Cdh4P39038 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cdh4P39038 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.94■□□□□ 0.78
Cdh4P39038 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.94■□□□□ 0.78
Cdh4P39038 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Cdh4P39038 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh4P39038 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
Cdh4P39038 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh4P39038 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh4P39038 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Cdh4P39038 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.93■□□□□ 0.78
Cdh4P39038 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.93■□□□□ 0.78
Cdh4P39038 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh4P39038 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh4P39038 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh4P39038 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cdh4P39038 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh4P39038 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cdh4P39038 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.92■□□□□ 0.78
Cdh4P39038 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cdh4P39038 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh4P39038 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cdh4P39038 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh4P39038 Gm7417-201ENSMUST00000192950 473 ntBASIC19.91■□□□□ 0.78
Cdh4P39038 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.91■□□□□ 0.78
Cdh4P39038 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh4P39038 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.91■□□□□ 0.78
Cdh4P39038 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cdh4P39038 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh4P39038 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh4P39038 Gm14117-201ENSMUST00000122417 843 ntBASIC19.9■□□□□ 0.78
Cdh4P39038 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.9■□□□□ 0.78
Cdh4P39038 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.9■□□□□ 0.78
Cdh4P39038 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh4P39038 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh4P39038 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh4P39038 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh4P39038 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh4P39038 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh4P39038 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh4P39038 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh4P39038 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cdh4P39038 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh4P39038 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.88■□□□□ 0.77
Cdh4P39038 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cdh4P39038 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh4P39038 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Cdh4P39038 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms