Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LdlrP35951 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.73■□□□□ 0.91
LdlrP35951 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LdlrP35951 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LdlrP35951 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LdlrP35951 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LdlrP35951 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LdlrP35951 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LdlrP35951 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LdlrP35951 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LdlrP35951 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LdlrP35951 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
LdlrP35951 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LdlrP35951 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LdlrP35951 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LdlrP35951 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LdlrP35951 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
LdlrP35951 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.72■□□□□ 0.91
LdlrP35951 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LdlrP35951 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LdlrP35951 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LdlrP35951 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LdlrP35951 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LdlrP35951 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LdlrP35951 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.71■□□□□ 0.91
LdlrP35951 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.71■□□□□ 0.91
LdlrP35951 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LdlrP35951 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LdlrP35951 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LdlrP35951 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LdlrP35951 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LdlrP35951 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LdlrP35951 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LdlrP35951 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LdlrP35951 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LdlrP35951 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LdlrP35951 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
LdlrP35951 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.7■□□□□ 0.9
LdlrP35951 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LdlrP35951 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LdlrP35951 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LdlrP35951 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.69■□□□□ 0.9
LdlrP35951 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LdlrP35951 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LdlrP35951 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LdlrP35951 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.68■□□□□ 0.9
LdlrP35951 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
LdlrP35951 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LdlrP35951 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LdlrP35951 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LdlrP35951 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LdlrP35951 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LdlrP35951 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LdlrP35951 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LdlrP35951 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LdlrP35951 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.67■□□□□ 0.9
LdlrP35951 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LdlrP35951 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LdlrP35951 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LdlrP35951 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LdlrP35951 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LdlrP35951 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LdlrP35951 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.66■□□□□ 0.9
LdlrP35951 Gm43566-201ENSMUST00000196851 808 ntBASIC20.66■□□□□ 0.9
LdlrP35951 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LdlrP35951 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LdlrP35951 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LdlrP35951 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
LdlrP35951 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LdlrP35951 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LdlrP35951 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LdlrP35951 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LdlrP35951 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
LdlrP35951 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LdlrP35951 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LdlrP35951 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
LdlrP35951 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
LdlrP35951 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LdlrP35951 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LdlrP35951 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
LdlrP35951 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LdlrP35951 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LdlrP35951 Rps24-207ENSMUST00000224568 714 ntBASIC20.64■□□□□ 0.89
LdlrP35951 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.64■□□□□ 0.89
LdlrP35951 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LdlrP35951 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LdlrP35951 Gm13238-201ENSMUST00000117655 780 ntBASIC20.63■□□□□ 0.89
LdlrP35951 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LdlrP35951 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LdlrP35951 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
LdlrP35951 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LdlrP35951 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LdlrP35951 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LdlrP35951 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LdlrP35951 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LdlrP35951 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LdlrP35951 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LdlrP35951 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LdlrP35951 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
LdlrP35951 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 117.1 ms