Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.72■□□□□ 0.75
ChrneP20782 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ChrneP20782 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ChrneP20782 Gm45102-201ENSMUST00000207427 857 ntBASIC19.72■□□□□ 0.75
ChrneP20782 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ChrneP20782 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ChrneP20782 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ChrneP20782 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ChrneP20782 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ChrneP20782 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ChrneP20782 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.74
ChrneP20782 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChrneP20782 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChrneP20782 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChrneP20782 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChrneP20782 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChrneP20782 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.7■□□□□ 0.74
ChrneP20782 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.7■□□□□ 0.74
ChrneP20782 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChrneP20782 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ChrneP20782 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ChrneP20782 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ChrneP20782 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChrneP20782 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.69■□□□□ 0.74
ChrneP20782 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.69■□□□□ 0.74
ChrneP20782 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChrneP20782 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ChrneP20782 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.69■□□□□ 0.74
ChrneP20782 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ChrneP20782 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ChrneP20782 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChrneP20782 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChrneP20782 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChrneP20782 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChrneP20782 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChrneP20782 Gm10399-202ENSMUST00000202768 748 ntBASIC19.68■□□□□ 0.74
ChrneP20782 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ChrneP20782 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.68■□□□□ 0.74
ChrneP20782 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChrneP20782 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChrneP20782 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChrneP20782 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChrneP20782 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ChrneP20782 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChrneP20782 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ChrneP20782 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChrneP20782 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ChrneP20782 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ChrneP20782 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
ChrneP20782 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChrneP20782 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChrneP20782 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ChrneP20782 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChrneP20782 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChrneP20782 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ChrneP20782 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.66■□□□□ 0.74
ChrneP20782 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChrneP20782 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChrneP20782 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChrneP20782 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChrneP20782 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChrneP20782 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChrneP20782 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
ChrneP20782 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ChrneP20782 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ChrneP20782 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ChrneP20782 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ChrneP20782 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.65■□□□□ 0.74
ChrneP20782 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.65■□□□□ 0.74
ChrneP20782 Gm9959-201ENSMUST00000068277 390 ntBASIC19.65■□□□□ 0.74
ChrneP20782 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ChrneP20782 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ChrneP20782 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ChrneP20782 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ChrneP20782 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.64■□□□□ 0.74
ChrneP20782 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.64■□□□□ 0.73
ChrneP20782 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.64■□□□□ 0.73
ChrneP20782 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.64■□□□□ 0.73
ChrneP20782 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ChrneP20782 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.64■□□□□ 0.73
ChrneP20782 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ChrneP20782 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
ChrneP20782 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ChrneP20782 Etf1-202ENSMUST00000180351 108 ntBASIC19.63■□□□□ 0.73
ChrneP20782 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ChrneP20782 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ChrneP20782 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
ChrneP20782 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ChrneP20782 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ChrneP20782 Gm40881-201ENSMUST00000223397 166 ntBASIC19.62■□□□□ 0.73
ChrneP20782 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ChrneP20782 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ChrneP20782 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
ChrneP20782 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ChrneP20782 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ChrneP20782 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ChrneP20782 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ChrneP20782 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ChrneP20782 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ChrneP20782 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms