Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccl3P10855 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccl3P10855 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccl3P10855 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccl3P10855 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccl3P10855 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccl3P10855 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccl3P10855 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.67■□□□□ 0.58
Ccl3P10855 Mir7075-201ENSMUST00000184187 82 ntBASIC18.67■□□□□ 0.58
Ccl3P10855 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccl3P10855 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccl3P10855 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccl3P10855 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccl3P10855 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ccl3P10855 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccl3P10855 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.66■□□□□ 0.58
Ccl3P10855 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccl3P10855 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccl3P10855 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccl3P10855 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccl3P10855 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccl3P10855 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccl3P10855 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccl3P10855 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccl3P10855 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Ccl3P10855 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Ccl3P10855 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.65■□□□□ 0.58
Ccl3P10855 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Ccl3P10855 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccl3P10855 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Ccl3P10855 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Ccl3P10855 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccl3P10855 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Ccl3P10855 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccl3P10855 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.64■□□□□ 0.57
Ccl3P10855 Gm43017-201ENSMUST00000198296 752 ntBASIC18.64■□□□□ 0.57
Ccl3P10855 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccl3P10855 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.64■□□□□ 0.57
Ccl3P10855 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Ccl3P10855 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ccl3P10855 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Ccl3P10855 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccl3P10855 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Ccl3P10855 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
Ccl3P10855 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.63■□□□□ 0.57
Ccl3P10855 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.63■□□□□ 0.57
Ccl3P10855 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccl3P10855 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccl3P10855 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccl3P10855 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccl3P10855 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Ccl3P10855 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccl3P10855 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccl3P10855 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccl3P10855 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Ccl3P10855 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.61■□□□□ 0.57
Ccl3P10855 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccl3P10855 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccl3P10855 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.61■□□□□ 0.57
Ccl3P10855 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccl3P10855 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccl3P10855 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccl3P10855 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccl3P10855 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccl3P10855 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Ccl3P10855 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccl3P10855 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccl3P10855 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccl3P10855 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccl3P10855 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccl3P10855 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.6■□□□□ 0.57
Ccl3P10855 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.6■□□□□ 0.57
Ccl3P10855 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccl3P10855 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
Ccl3P10855 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
Ccl3P10855 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccl3P10855 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccl3P10855 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccl3P10855 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccl3P10855 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.59■□□□□ 0.57
Ccl3P10855 Gm8493-201ENSMUST00000196881 489 ntBASIC18.59■□□□□ 0.57
Ccl3P10855 Gm7143-201ENSMUST00000222811 859 ntBASIC18.59■□□□□ 0.57
Ccl3P10855 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccl3P10855 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccl3P10855 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccl3P10855 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Ccl3P10855 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccl3P10855 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccl3P10855 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
Ccl3P10855 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccl3P10855 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Ccl3P10855 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccl3P10855 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccl3P10855 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccl3P10855 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Ccl3P10855 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Ccl3P10855 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccl3P10855 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ccl3P10855 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Ccl3P10855 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms