Protein–RNA interactions for Protein: P04441

Cd74, H-2 class II histocompatibility antigen gamma chain, mousemouse

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd74P04441 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd74P04441 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd74P04441 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd74P04441 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd74P04441 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cd74P04441 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cd74P04441 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd74P04441 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd74P04441 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd74P04441 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cd74P04441 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cd74P04441 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd74P04441 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC17.4■□□□□ 0.38
Cd74P04441 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.4■□□□□ 0.38
Cd74P04441 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cd74P04441 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd74P04441 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cd74P04441 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Cd74P04441 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.39■□□□□ 0.37
Cd74P04441 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.39■□□□□ 0.37
Cd74P04441 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd74P04441 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.39■□□□□ 0.37
Cd74P04441 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cd74P04441 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd74P04441 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cd74P04441 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd74P04441 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd74P04441 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd74P04441 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.38■□□□□ 0.37
Cd74P04441 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd74P04441 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd74P04441 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd74P04441 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd74P04441 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd74P04441 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cd74P04441 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.37■□□□□ 0.37
Cd74P04441 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Cd74P04441 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd74P04441 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd74P04441 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cd74P04441 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd74P04441 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cd74P04441 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd74P04441 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.36■□□□□ 0.37
Cd74P04441 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd74P04441 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd74P04441 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cd74P04441 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd74P04441 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd74P04441 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd74P04441 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cd74P04441 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cd74P04441 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd74P04441 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cd74P04441 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd74P04441 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.35■□□□□ 0.37
Cd74P04441 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd74P04441 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cd74P04441 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd74P04441 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cd74P04441 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Cd74P04441 Gm14117-201ENSMUST00000122417 843 ntBASIC17.34■□□□□ 0.37
Cd74P04441 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd74P04441 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Cd74P04441 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd74P04441 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd74P04441 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Cd74P04441 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd74P04441 Gm9959-201ENSMUST00000068277 390 ntBASIC17.34■□□□□ 0.37
Cd74P04441 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd74P04441 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd74P04441 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cd74P04441 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cd74P04441 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.33■□□□□ 0.37
Cd74P04441 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cd74P04441 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.33■□□□□ 0.37
Cd74P04441 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.33■□□□□ 0.36
Cd74P04441 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.33■□□□□ 0.36
Cd74P04441 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cd74P04441 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd74P04441 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd74P04441 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd74P04441 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Cd74P04441 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cd74P04441 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cd74P04441 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd74P04441 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd74P04441 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd74P04441 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd74P04441 Etf1-202ENSMUST00000180351 108 ntBASIC17.32■□□□□ 0.36
Cd74P04441 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd74P04441 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd74P04441 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cd74P04441 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd74P04441 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cd74P04441 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Cd74P04441 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cd74P04441 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Cd74P04441 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Cd74P04441 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms