Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CfdP03953 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CfdP03953 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CfdP03953 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CfdP03953 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
CfdP03953 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CfdP03953 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CfdP03953 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CfdP03953 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CfdP03953 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CfdP03953 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CfdP03953 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CfdP03953 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
CfdP03953 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CfdP03953 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CfdP03953 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CfdP03953 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
CfdP03953 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CfdP03953 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CfdP03953 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CfdP03953 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CfdP03953 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CfdP03953 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CfdP03953 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.45■□□□□ 0.38
CfdP03953 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.45■□□□□ 0.38
CfdP03953 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CfdP03953 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CfdP03953 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CfdP03953 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CfdP03953 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CfdP03953 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CfdP03953 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CfdP03953 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CfdP03953 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CfdP03953 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CfdP03953 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CfdP03953 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CfdP03953 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CfdP03953 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CfdP03953 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CfdP03953 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CfdP03953 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CfdP03953 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CfdP03953 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
CfdP03953 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CfdP03953 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CfdP03953 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CfdP03953 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CfdP03953 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CfdP03953 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CfdP03953 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CfdP03953 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CfdP03953 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CfdP03953 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CfdP03953 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.43■□□□□ 0.38
CfdP03953 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CfdP03953 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CfdP03953 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CfdP03953 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CfdP03953 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CfdP03953 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CfdP03953 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CfdP03953 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CfdP03953 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
CfdP03953 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.42■□□□□ 0.38
CfdP03953 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.42■□□□□ 0.38
CfdP03953 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CfdP03953 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CfdP03953 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CfdP03953 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CfdP03953 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CfdP03953 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CfdP03953 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CfdP03953 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CfdP03953 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CfdP03953 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CfdP03953 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CfdP03953 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CfdP03953 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.41■□□□□ 0.38
CfdP03953 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CfdP03953 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CfdP03953 Gm44428-201ENSMUST00000204474 874 ntBASIC17.41■□□□□ 0.38
CfdP03953 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CfdP03953 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CfdP03953 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CfdP03953 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CfdP03953 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CfdP03953 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CfdP03953 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CfdP03953 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CfdP03953 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CfdP03953 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CfdP03953 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CfdP03953 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CfdP03953 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.4■□□□□ 0.38
CfdP03953 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CfdP03953 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CfdP03953 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CfdP03953 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CfdP03953 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms