Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NgfP01139 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.66■□□□□ 0.58
NgfP01139 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.66■□□□□ 0.58
NgfP01139 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NgfP01139 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NgfP01139 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NgfP01139 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NgfP01139 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.66■□□□□ 0.58
NgfP01139 Gm7143-201ENSMUST00000222811 859 ntBASIC18.66■□□□□ 0.58
NgfP01139 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.66■□□□□ 0.58
NgfP01139 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NgfP01139 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NgfP01139 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.66■□□□□ 0.58
NgfP01139 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NgfP01139 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NgfP01139 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NgfP01139 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NgfP01139 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NgfP01139 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NgfP01139 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NgfP01139 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NgfP01139 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NgfP01139 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NgfP01139 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NgfP01139 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.65■□□□□ 0.58
NgfP01139 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.65■□□□□ 0.58
NgfP01139 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NgfP01139 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NgfP01139 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NgfP01139 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NgfP01139 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NgfP01139 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NgfP01139 Il17rd-202ENSMUST00000223942 2186 ntBASIC18.64■□□□□ 0.57
NgfP01139 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NgfP01139 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NgfP01139 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NgfP01139 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NgfP01139 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NgfP01139 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NgfP01139 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NgfP01139 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NgfP01139 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NgfP01139 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.62■□□□□ 0.57
NgfP01139 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NgfP01139 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NgfP01139 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NgfP01139 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.61■□□□□ 0.57
NgfP01139 Gm6139-201ENSMUST00000079261 882 ntBASIC18.61■□□□□ 0.57
NgfP01139 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NgfP01139 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NgfP01139 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NgfP01139 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NgfP01139 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NgfP01139 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
NgfP01139 Gm43137-201ENSMUST00000198052 594 ntBASIC18.6■□□□□ 0.57
NgfP01139 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NgfP01139 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NgfP01139 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NgfP01139 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
NgfP01139 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
NgfP01139 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NgfP01139 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NgfP01139 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
NgfP01139 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NgfP01139 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NgfP01139 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NgfP01139 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
NgfP01139 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NgfP01139 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NgfP01139 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NgfP01139 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NgfP01139 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
NgfP01139 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
NgfP01139 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NgfP01139 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NgfP01139 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NgfP01139 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.57■□□□□ 0.56
NgfP01139 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NgfP01139 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
NgfP01139 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NgfP01139 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NgfP01139 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NgfP01139 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NgfP01139 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.56■□□□□ 0.56
NgfP01139 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NgfP01139 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
NgfP01139 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NgfP01139 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NgfP01139 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NgfP01139 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NgfP01139 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.56■□□□□ 0.56
NgfP01139 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NgfP01139 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NgfP01139 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.55■□□□□ 0.56
NgfP01139 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NgfP01139 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
NgfP01139 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
NgfP01139 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.54■□□□□ 0.56
NgfP01139 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.54■□□□□ 0.56
NgfP01139 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms