Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn1O88551 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.86■□□□□ 0.45
Cldn1O88551 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Cldn1O88551 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn1O88551 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cldn1O88551 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn1O88551 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn1O88551 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.85■□□□□ 0.45
Cldn1O88551 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn1O88551 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn1O88551 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.85■□□□□ 0.45
Cldn1O88551 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Cldn1O88551 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
Cldn1O88551 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn1O88551 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn1O88551 Gm6139-201ENSMUST00000079261 882 ntBASIC17.85■□□□□ 0.45
Cldn1O88551 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Cldn1O88551 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn1O88551 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Cldn1O88551 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn1O88551 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.84■□□□□ 0.45
Cldn1O88551 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Cldn1O88551 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn1O88551 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.84■□□□□ 0.45
Cldn1O88551 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn1O88551 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn1O88551 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn1O88551 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn1O88551 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Cldn1O88551 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.83■□□□□ 0.45
Cldn1O88551 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Cldn1O88551 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Cldn1O88551 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn1O88551 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.83■□□□□ 0.44
Cldn1O88551 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.83■□□□□ 0.44
Cldn1O88551 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Cldn1O88551 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn1O88551 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn1O88551 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn1O88551 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn1O88551 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn1O88551 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Cldn1O88551 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn1O88551 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn1O88551 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn1O88551 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Cldn1O88551 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn1O88551 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn1O88551 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn1O88551 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.81■□□□□ 0.44
Cldn1O88551 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Cldn1O88551 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Cldn1O88551 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn1O88551 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn1O88551 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn1O88551 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Cldn1O88551 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cldn1O88551 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.8■□□□□ 0.44
Cldn1O88551 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Cldn1O88551 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Cldn1O88551 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cldn1O88551 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cldn1O88551 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn1O88551 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn1O88551 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn1O88551 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.79■□□□□ 0.44
Cldn1O88551 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn1O88551 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cldn1O88551 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.78■□□□□ 0.44
Cldn1O88551 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Cldn1O88551 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn1O88551 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.78■□□□□ 0.44
Cldn1O88551 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn1O88551 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn1O88551 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.78■□□□□ 0.44
Cldn1O88551 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn1O88551 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cldn1O88551 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cldn1O88551 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC17.77■□□□□ 0.44
Cldn1O88551 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cldn1O88551 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cldn1O88551 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
Cldn1O88551 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn1O88551 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn1O88551 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Cldn1O88551 Gm43017-201ENSMUST00000198296 752 ntBASIC17.76■□□□□ 0.43
Cldn1O88551 Gm21168-201ENSMUST00000199646 1096 ntBASIC17.76■□□□□ 0.43
Cldn1O88551 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC17.76■□□□□ 0.43
Cldn1O88551 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn1O88551 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn1O88551 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn1O88551 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.76■□□□□ 0.43
Cldn1O88551 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC17.76■□□□□ 0.43
Cldn1O88551 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cldn1O88551 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Cldn1O88551 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn1O88551 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn1O88551 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn1O88551 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cldn1O88551 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms