Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ttc3O88196 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Ttc3O88196 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
Ttc3O88196 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ttc3O88196 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.27■■□□□ 1.16
Ttc3O88196 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ttc3O88196 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ttc3O88196 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ttc3O88196 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ttc3O88196 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ttc3O88196 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Ttc3O88196 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ttc3O88196 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Ttc3O88196 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Ttc3O88196 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Ttc3O88196 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ttc3O88196 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.26■■□□□ 1.15
Ttc3O88196 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.26■■□□□ 1.15
Ttc3O88196 Gm45417-201ENSMUST00000209533 758 ntBASIC22.26■■□□□ 1.15
Ttc3O88196 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ttc3O88196 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ttc3O88196 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ttc3O88196 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.25■■□□□ 1.15
Ttc3O88196 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC22.25■■□□□ 1.15
Ttc3O88196 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ttc3O88196 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ttc3O88196 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.25■■□□□ 1.15
Ttc3O88196 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ttc3O88196 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Ttc3O88196 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ttc3O88196 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ttc3O88196 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC22.24■■□□□ 1.15
Ttc3O88196 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ttc3O88196 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ttc3O88196 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Ttc3O88196 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC22.23■■□□□ 1.15
Ttc3O88196 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Ttc3O88196 Gm12821-201ENSMUST00000120022 600 ntBASIC22.23■■□□□ 1.15
Ttc3O88196 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ttc3O88196 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ttc3O88196 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ttc3O88196 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ttc3O88196 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ttc3O88196 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ttc3O88196 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ttc3O88196 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ttc3O88196 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC22.21■■□□□ 1.15
Ttc3O88196 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ttc3O88196 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ttc3O88196 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ttc3O88196 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ttc3O88196 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC22.21■■□□□ 1.15
Ttc3O88196 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.21■■□□□ 1.15
Ttc3O88196 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Ttc3O88196 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Ttc3O88196 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ttc3O88196 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Ttc3O88196 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ttc3O88196 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.19■■□□□ 1.14
Ttc3O88196 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ttc3O88196 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ttc3O88196 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ttc3O88196 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC22.19■■□□□ 1.14
Ttc3O88196 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Ttc3O88196 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.19■■□□□ 1.14
Ttc3O88196 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ttc3O88196 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ttc3O88196 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ttc3O88196 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ttc3O88196 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ttc3O88196 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC22.18■■□□□ 1.14
Ttc3O88196 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Ttc3O88196 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
Ttc3O88196 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ttc3O88196 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ttc3O88196 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Ttc3O88196 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ttc3O88196 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ttc3O88196 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ttc3O88196 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ttc3O88196 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.17■■□□□ 1.14
Ttc3O88196 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ttc3O88196 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ttc3O88196 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.17■■□□□ 1.14
Ttc3O88196 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ttc3O88196 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Ttc3O88196 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC22.16■■□□□ 1.14
Ttc3O88196 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
Ttc3O88196 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
Ttc3O88196 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ttc3O88196 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ttc3O88196 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ttc3O88196 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ttc3O88196 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ttc3O88196 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.16■■□□□ 1.14
Ttc3O88196 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ttc3O88196 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ttc3O88196 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ttc3O88196 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Ttc3O88196 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms