Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BckdkO55028 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BckdkO55028 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BckdkO55028 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
BckdkO55028 Etf1-202ENSMUST00000180351 108 ntBASIC19.29■□□□□ 0.68
BckdkO55028 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BckdkO55028 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BckdkO55028 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.29■□□□□ 0.68
BckdkO55028 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BckdkO55028 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BckdkO55028 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.29■□□□□ 0.68
BckdkO55028 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.28■□□□□ 0.68
BckdkO55028 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
BckdkO55028 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BckdkO55028 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
BckdkO55028 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BckdkO55028 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BckdkO55028 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.28■□□□□ 0.68
BckdkO55028 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.28■□□□□ 0.68
BckdkO55028 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
BckdkO55028 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BckdkO55028 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BckdkO55028 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BckdkO55028 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BckdkO55028 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BckdkO55028 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BckdkO55028 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.27■□□□□ 0.68
BckdkO55028 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BckdkO55028 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
BckdkO55028 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BckdkO55028 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BckdkO55028 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
BckdkO55028 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BckdkO55028 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BckdkO55028 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BckdkO55028 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
BckdkO55028 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BckdkO55028 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BckdkO55028 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BckdkO55028 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
BckdkO55028 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BckdkO55028 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.26■□□□□ 0.67
BckdkO55028 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BckdkO55028 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BckdkO55028 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BckdkO55028 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.25■□□□□ 0.67
BckdkO55028 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.25■□□□□ 0.67
BckdkO55028 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.25■□□□□ 0.67
BckdkO55028 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BckdkO55028 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BckdkO55028 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.25■□□□□ 0.67
BckdkO55028 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BckdkO55028 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.24■□□□□ 0.67
BckdkO55028 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BckdkO55028 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.24■□□□□ 0.67
BckdkO55028 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BckdkO55028 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BckdkO55028 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.24■□□□□ 0.67
BckdkO55028 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.24■□□□□ 0.67
BckdkO55028 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BckdkO55028 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BckdkO55028 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BckdkO55028 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BckdkO55028 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BckdkO55028 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.23■□□□□ 0.67
BckdkO55028 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BckdkO55028 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.23■□□□□ 0.67
BckdkO55028 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BckdkO55028 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BckdkO55028 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BckdkO55028 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BckdkO55028 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BckdkO55028 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BckdkO55028 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BckdkO55028 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BckdkO55028 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BckdkO55028 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BckdkO55028 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BckdkO55028 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.22■□□□□ 0.67
BckdkO55028 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BckdkO55028 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
BckdkO55028 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BckdkO55028 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.21■□□□□ 0.67
BckdkO55028 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
BckdkO55028 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BckdkO55028 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.2■□□□□ 0.66
BckdkO55028 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BckdkO55028 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BckdkO55028 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
BckdkO55028 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.2■□□□□ 0.66
BckdkO55028 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BckdkO55028 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BckdkO55028 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
BckdkO55028 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
BckdkO55028 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.19■□□□□ 0.66
BckdkO55028 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
BckdkO55028 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BckdkO55028 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
BckdkO55028 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
BckdkO55028 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms