Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.07■□□□□ 0.48
Dkk1O54908 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Dkk1O54908 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
Dkk1O54908 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dkk1O54908 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dkk1O54908 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Dkk1O54908 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dkk1O54908 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.06■□□□□ 0.48
Dkk1O54908 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dkk1O54908 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dkk1O54908 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dkk1O54908 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Dkk1O54908 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Dkk1O54908 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dkk1O54908 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Dkk1O54908 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Dkk1O54908 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.05■□□□□ 0.48
Dkk1O54908 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.05■□□□□ 0.48
Dkk1O54908 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dkk1O54908 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Dkk1O54908 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Dkk1O54908 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Dkk1O54908 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Dkk1O54908 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC18.04■□□□□ 0.48
Dkk1O54908 Gm28196-201ENSMUST00000187719 640 ntBASIC18.04■□□□□ 0.48
Dkk1O54908 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.04■□□□□ 0.48
Dkk1O54908 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.04■□□□□ 0.48
Dkk1O54908 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Dkk1O54908 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dkk1O54908 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dkk1O54908 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Dkk1O54908 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dkk1O54908 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.03■□□□□ 0.48
Dkk1O54908 Gm15820-201ENSMUST00000201566 728 ntBASIC18.03■□□□□ 0.48
Dkk1O54908 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.03■□□□□ 0.48
Dkk1O54908 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Dkk1O54908 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Dkk1O54908 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Dkk1O54908 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.02■□□□□ 0.48
Dkk1O54908 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Dkk1O54908 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Dkk1O54908 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.02■□□□□ 0.48
Dkk1O54908 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Dkk1O54908 Gm10399-202ENSMUST00000202768 748 ntBASIC18.02■□□□□ 0.48
Dkk1O54908 Gm44882-201ENSMUST00000205702 802 ntBASIC18.02■□□□□ 0.48
Dkk1O54908 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Dkk1O54908 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Dkk1O54908 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dkk1O54908 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dkk1O54908 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dkk1O54908 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.01■□□□□ 0.47
Dkk1O54908 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dkk1O54908 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dkk1O54908 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dkk1O54908 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
Dkk1O54908 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dkk1O54908 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Dkk1O54908 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Dkk1O54908 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Dkk1O54908 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Dkk1O54908 Gm43403-201ENSMUST00000198011 1786 ntBASIC18■□□□□ 0.47
Dkk1O54908 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dkk1O54908 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18■□□□□ 0.47
Dkk1O54908 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dkk1O54908 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18■□□□□ 0.47
Dkk1O54908 AC154532.1-201ENSMUST00000227860 965 ntBASIC18■□□□□ 0.47
Dkk1O54908 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC18■□□□□ 0.47
Dkk1O54908 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dkk1O54908 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dkk1O54908 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Dkk1O54908 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dkk1O54908 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.99■□□□□ 0.47
Dkk1O54908 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Dkk1O54908 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.99■□□□□ 0.47
Dkk1O54908 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dkk1O54908 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Dkk1O54908 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dkk1O54908 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dkk1O54908 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dkk1O54908 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Dkk1O54908 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.98■□□□□ 0.47
Dkk1O54908 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Dkk1O54908 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Dkk1O54908 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dkk1O54908 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dkk1O54908 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Dkk1O54908 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Dkk1O54908 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Dkk1O54908 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dkk1O54908 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dkk1O54908 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dkk1O54908 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dkk1O54908 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Dkk1O54908 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dkk1O54908 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.96■□□□□ 0.47
Dkk1O54908 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dkk1O54908 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Dkk1O54908 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Dkk1O54908 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Dkk1O54908 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms