Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Efnb3O35393 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Efnb3O35393 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Efnb3O35393 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Efnb3O35393 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Efnb3O35393 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Efnb3O35393 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.44■□□□□ 0.22
Efnb3O35393 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Efnb3O35393 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Efnb3O35393 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Efnb3O35393 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Efnb3O35393 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Efnb3O35393 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Efnb3O35393 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Efnb3O35393 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Efnb3O35393 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.43■□□□□ 0.22
Efnb3O35393 Gm9806-201ENSMUST00000051080 552 ntBASIC16.43■□□□□ 0.22
Efnb3O35393 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Efnb3O35393 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Efnb3O35393 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Efnb3O35393 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Efnb3O35393 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Efnb3O35393 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Efnb3O35393 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Efnb3O35393 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Efnb3O35393 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Efnb3O35393 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Efnb3O35393 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Efnb3O35393 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.42■□□□□ 0.22
Efnb3O35393 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC16.42■□□□□ 0.22
Efnb3O35393 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Efnb3O35393 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Efnb3O35393 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Efnb3O35393 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Efnb3O35393 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Efnb3O35393 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Efnb3O35393 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Efnb3O35393 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Efnb3O35393 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Efnb3O35393 Scarna2-201ENSMUST00000157560 414 ntBASIC16.41■□□□□ 0.22
Efnb3O35393 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC16.41■□□□□ 0.22
Efnb3O35393 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Efnb3O35393 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Efnb3O35393 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.41■□□□□ 0.22
Efnb3O35393 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.41■□□□□ 0.22
Efnb3O35393 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Efnb3O35393 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.41■□□□□ 0.22
Efnb3O35393 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Efnb3O35393 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Efnb3O35393 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Efnb3O35393 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Efnb3O35393 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Efnb3O35393 Gm11687-201ENSMUST00000118911 886 ntBASIC16.4■□□□□ 0.22
Efnb3O35393 Mir6538-201ENSMUST00000183713 110 ntBASIC16.4■□□□□ 0.22
Efnb3O35393 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Efnb3O35393 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Efnb3O35393 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Efnb3O35393 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Efnb3O35393 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Efnb3O35393 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Efnb3O35393 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Efnb3O35393 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Efnb3O35393 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Efnb3O35393 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
Efnb3O35393 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC16.39■□□□□ 0.21
Efnb3O35393 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Efnb3O35393 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Efnb3O35393 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Efnb3O35393 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.39■□□□□ 0.21
Efnb3O35393 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC16.39■□□□□ 0.21
Efnb3O35393 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.39■□□□□ 0.21
Efnb3O35393 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Efnb3O35393 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Efnb3O35393 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Efnb3O35393 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Efnb3O35393 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Efnb3O35393 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Efnb3O35393 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Efnb3O35393 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Efnb3O35393 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Efnb3O35393 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Efnb3O35393 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC16.38■□□□□ 0.21
Efnb3O35393 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Efnb3O35393 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Efnb3O35393 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC16.38■□□□□ 0.21
Efnb3O35393 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Efnb3O35393 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Efnb3O35393 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Efnb3O35393 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Efnb3O35393 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Efnb3O35393 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Efnb3O35393 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Efnb3O35393 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Efnb3O35393 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Efnb3O35393 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Efnb3O35393 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Efnb3O35393 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Efnb3O35393 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Efnb3O35393 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Efnb3O35393 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms