Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pkd1O08852 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1O08852 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC13.64□□□□□ -0.23
Pkd1O08852 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pkd1O08852 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1O08852 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1O08852 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1O08852 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pkd1O08852 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.64□□□□□ -0.23
Pkd1O08852 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1O08852 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Pkd1O08852 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1O08852 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pkd1O08852 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1O08852 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC13.63□□□□□ -0.23
Pkd1O08852 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC13.63□□□□□ -0.23
Pkd1O08852 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1O08852 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1O08852 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1O08852 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC13.63□□□□□ -0.23
Pkd1O08852 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pkd1O08852 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pkd1O08852 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1O08852 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.62□□□□□ -0.23
Pkd1O08852 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1O08852 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1O08852 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC13.62□□□□□ -0.23
Pkd1O08852 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1O08852 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1O08852 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1O08852 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1O08852 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC13.62□□□□□ -0.23
Pkd1O08852 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC13.62□□□□□ -0.23
Pkd1O08852 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.62□□□□□ -0.23
Pkd1O08852 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC13.62□□□□□ -0.23
Pkd1O08852 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1O08852 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pkd1O08852 Gm43060-201ENSMUST00000200621 289 ntBASIC13.61□□□□□ -0.23
Pkd1O08852 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pkd1O08852 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pkd1O08852 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pkd1O08852 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pkd1O08852 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pkd1O08852 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pkd1O08852 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Pkd1O08852 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pkd1O08852 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pkd1O08852 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Pkd1O08852 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pkd1O08852 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Pkd1O08852 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Pkd1O08852 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pkd1O08852 Spcs1-204ENSMUST00000226782 949 ntBASIC13.6□□□□□ -0.23
Pkd1O08852 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pkd1O08852 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Pkd1O08852 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Pkd1O08852 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Pkd1O08852 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.59□□□□□ -0.23
Pkd1O08852 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pkd1O08852 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC13.59□□□□□ -0.23
Pkd1O08852 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pkd1O08852 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pkd1O08852 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC13.59□□□□□ -0.23
Pkd1O08852 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC13.59□□□□□ -0.23
Pkd1O08852 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pkd1O08852 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pkd1O08852 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.59□□□□□ -0.23
Pkd1O08852 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pkd1O08852 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Pkd1O08852 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Pkd1O08852 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.58□□□□□ -0.24
Pkd1O08852 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pkd1O08852 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pkd1O08852 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pkd1O08852 Gm42642-201ENSMUST00000200683 355 ntBASIC13.58□□□□□ -0.24
Pkd1O08852 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pkd1O08852 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pkd1O08852 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pkd1O08852 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Pkd1O08852 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Pkd1O08852 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pkd1O08852 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC13.57□□□□□ -0.24
Pkd1O08852 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.57□□□□□ -0.24
Pkd1O08852 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pkd1O08852 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pkd1O08852 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pkd1O08852 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pkd1O08852 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pkd1O08852 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pkd1O08852 Gm6085-201ENSMUST00000182774 1470 ntBASIC13.56□□□□□ -0.24
Pkd1O08852 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pkd1O08852 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pkd1O08852 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC13.56□□□□□ -0.24
Pkd1O08852 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pkd1O08852 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pkd1O08852 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.56□□□□□ -0.24
Pkd1O08852 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC13.56□□□□□ -0.24
Pkd1O08852 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pkd1O08852 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pkd1O08852 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms