Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm21788J3QNH3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.67■□□□□ 0.42
Gm21788J3QNH3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.67■□□□□ 0.42
Gm21788J3QNH3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gm21788J3QNH3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm21788J3QNH3 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gm21788J3QNH3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21788J3QNH3 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21788J3QNH3 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21788J3QNH3 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Gm21788J3QNH3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21788J3QNH3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.66■□□□□ 0.42
Gm21788J3QNH3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gm21788J3QNH3 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gm21788J3QNH3 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm21788J3QNH3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Gm21788J3QNH3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm21788J3QNH3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm21788J3QNH3 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm21788J3QNH3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gm21788J3QNH3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Gm21788J3QNH3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gm21788J3QNH3 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm21788J3QNH3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.65■□□□□ 0.42
Gm21788J3QNH3 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm21788J3QNH3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm21788J3QNH3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gm21788J3QNH3 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gm21788J3QNH3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Gm21788J3QNH3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21788J3QNH3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21788J3QNH3 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21788J3QNH3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Gm21788J3QNH3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Gm21788J3QNH3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.62■□□□□ 0.41
Gm21788J3QNH3 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.62■□□□□ 0.41
Gm21788J3QNH3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Gm21788J3QNH3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21788J3QNH3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21788J3QNH3 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Gm21788J3QNH3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Gm21788J3QNH3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Gm21788J3QNH3 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21788J3QNH3 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.61■□□□□ 0.41
Gm21788J3QNH3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Gm21788J3QNH3 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21788J3QNH3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21788J3QNH3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21788J3QNH3 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC17.6■□□□□ 0.41
Gm21788J3QNH3 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21788J3QNH3 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.6■□□□□ 0.41
Gm21788J3QNH3 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Gm21788J3QNH3 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21788J3QNH3 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21788J3QNH3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21788J3QNH3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.59■□□□□ 0.41
Gm21788J3QNH3 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.59■□□□□ 0.41
Gm21788J3QNH3 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.59■□□□□ 0.41
Gm21788J3QNH3 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.59■□□□□ 0.41
Gm21788J3QNH3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Gm21788J3QNH3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21788J3QNH3 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.58■□□□□ 0.4
Gm21788J3QNH3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Gm21788J3QNH3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.4
Gm21788J3QNH3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21788J3QNH3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21788J3QNH3 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Gm21788J3QNH3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21788J3QNH3 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21788J3QNH3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21788J3QNH3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.57■□□□□ 0.4
Gm21788J3QNH3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21788J3QNH3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Gm21788J3QNH3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21788J3QNH3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Gm21788J3QNH3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21788J3QNH3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21788J3QNH3 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21788J3QNH3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21788J3QNH3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21788J3QNH3 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Gm21788J3QNH3 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm21788J3QNH3 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm21788J3QNH3 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Gm21788J3QNH3 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms