Protein–RNA interactions for Protein: D3Z1D3

3425401B19Rik, RIKEN cDNA 3425401B19 gene, mousemouse

Predictions only

Length 1,412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
3425401B19RikD3Z1D3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
3425401B19RikD3Z1D3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
3425401B19RikD3Z1D3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
3425401B19RikD3Z1D3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC31.46■■■□□ 2.63
3425401B19RikD3Z1D3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
3425401B19RikD3Z1D3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
3425401B19RikD3Z1D3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC31.46■■■□□ 2.63
3425401B19RikD3Z1D3 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC31.46■■■□□ 2.63
3425401B19RikD3Z1D3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC31.45■■■□□ 2.63
3425401B19RikD3Z1D3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
3425401B19RikD3Z1D3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
3425401B19RikD3Z1D3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
3425401B19RikD3Z1D3 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
3425401B19RikD3Z1D3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
3425401B19RikD3Z1D3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
3425401B19RikD3Z1D3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC31.44■■■□□ 2.62
3425401B19RikD3Z1D3 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC31.44■■■□□ 2.62
3425401B19RikD3Z1D3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
3425401B19RikD3Z1D3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
3425401B19RikD3Z1D3 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC31.43■■■□□ 2.62
3425401B19RikD3Z1D3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC31.43■■■□□ 2.62
3425401B19RikD3Z1D3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
3425401B19RikD3Z1D3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
3425401B19RikD3Z1D3 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
3425401B19RikD3Z1D3 Gm42418-201ENSMUST00000182010 1831 ntBASIC31.42■■■□□ 2.62
3425401B19RikD3Z1D3 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
3425401B19RikD3Z1D3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
3425401B19RikD3Z1D3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
3425401B19RikD3Z1D3 AC140930.3-201ENSMUST00000222935 274 ntBASIC31.41■■■□□ 2.62
3425401B19RikD3Z1D3 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
3425401B19RikD3Z1D3 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
3425401B19RikD3Z1D3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC31.39■■■□□ 2.62
3425401B19RikD3Z1D3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC31.38■■■□□ 2.61
3425401B19RikD3Z1D3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
3425401B19RikD3Z1D3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
3425401B19RikD3Z1D3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
3425401B19RikD3Z1D3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
3425401B19RikD3Z1D3 Gm4430-201ENSMUST00000192413 1943 ntBASIC31.37■■■□□ 2.61
3425401B19RikD3Z1D3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
3425401B19RikD3Z1D3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
3425401B19RikD3Z1D3 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
3425401B19RikD3Z1D3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC31.35■■■□□ 2.61
3425401B19RikD3Z1D3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
3425401B19RikD3Z1D3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
3425401B19RikD3Z1D3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
3425401B19RikD3Z1D3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC31.35■■■□□ 2.61
3425401B19RikD3Z1D3 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
3425401B19RikD3Z1D3 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC31.34■■■□□ 2.61
3425401B19RikD3Z1D3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
3425401B19RikD3Z1D3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC31.34■■■□□ 2.61
3425401B19RikD3Z1D3 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC31.34■■■□□ 2.61
3425401B19RikD3Z1D3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
3425401B19RikD3Z1D3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
3425401B19RikD3Z1D3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
3425401B19RikD3Z1D3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC31.34■■■□□ 2.61
3425401B19RikD3Z1D3 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC31.33■■■□□ 2.61
3425401B19RikD3Z1D3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
3425401B19RikD3Z1D3 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
3425401B19RikD3Z1D3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC31.32■■■□□ 2.61
3425401B19RikD3Z1D3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
3425401B19RikD3Z1D3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
3425401B19RikD3Z1D3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
3425401B19RikD3Z1D3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
3425401B19RikD3Z1D3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
3425401B19RikD3Z1D3 Gm27454-201ENSMUST00000185090 204 ntBASIC31.32■■■□□ 2.6
3425401B19RikD3Z1D3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
3425401B19RikD3Z1D3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
3425401B19RikD3Z1D3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
3425401B19RikD3Z1D3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
3425401B19RikD3Z1D3 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
3425401B19RikD3Z1D3 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
3425401B19RikD3Z1D3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
3425401B19RikD3Z1D3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
3425401B19RikD3Z1D3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
3425401B19RikD3Z1D3 Gm9870-201ENSMUST00000063874 645 ntBASIC31.3■■■□□ 2.6
3425401B19RikD3Z1D3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC31.29■■■□□ 2.6
3425401B19RikD3Z1D3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC31.29■■■□□ 2.6
3425401B19RikD3Z1D3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC31.29■■■□□ 2.6
3425401B19RikD3Z1D3 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
3425401B19RikD3Z1D3 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
3425401B19RikD3Z1D3 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC31.28■■■□□ 2.6
3425401B19RikD3Z1D3 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
3425401B19RikD3Z1D3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
3425401B19RikD3Z1D3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
3425401B19RikD3Z1D3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
3425401B19RikD3Z1D3 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
3425401B19RikD3Z1D3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
3425401B19RikD3Z1D3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC31.27■■■□□ 2.6
3425401B19RikD3Z1D3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC31.26■■■□□ 2.6
3425401B19RikD3Z1D3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
3425401B19RikD3Z1D3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC31.25■■■□□ 2.59
3425401B19RikD3Z1D3 Gm10657-201ENSMUST00000193528 1031 ntBASIC31.25■■■□□ 2.59
3425401B19RikD3Z1D3 Krt8-ps-201ENSMUST00000208495 945 ntBASIC31.25■■■□□ 2.59
3425401B19RikD3Z1D3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
3425401B19RikD3Z1D3 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
3425401B19RikD3Z1D3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
3425401B19RikD3Z1D3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
3425401B19RikD3Z1D3 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
3425401B19RikD3Z1D3 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
3425401B19RikD3Z1D3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 1412.9 ms