Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Clip3B9EHT4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clip3B9EHT4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clip3B9EHT4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clip3B9EHT4 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clip3B9EHT4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clip3B9EHT4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Clip3B9EHT4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.08■□□□□ 0.81
Clip3B9EHT4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.08■□□□□ 0.81
Clip3B9EHT4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clip3B9EHT4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clip3B9EHT4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Clip3B9EHT4 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip3B9EHT4 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Clip3B9EHT4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Clip3B9EHT4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.07■□□□□ 0.8
Clip3B9EHT4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clip3B9EHT4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip3B9EHT4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip3B9EHT4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip3B9EHT4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clip3B9EHT4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.07■□□□□ 0.8
Clip3B9EHT4 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip3B9EHT4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Clip3B9EHT4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Clip3B9EHT4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.06■□□□□ 0.8
Clip3B9EHT4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.06■□□□□ 0.8
Clip3B9EHT4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.06■□□□□ 0.8
Clip3B9EHT4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip3B9EHT4 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clip3B9EHT4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Clip3B9EHT4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clip3B9EHT4 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip3B9EHT4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip3B9EHT4 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.05■□□□□ 0.8
Clip3B9EHT4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip3B9EHT4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clip3B9EHT4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.04■□□□□ 0.8
Clip3B9EHT4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.04■□□□□ 0.8
Clip3B9EHT4 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Clip3B9EHT4 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clip3B9EHT4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip3B9EHT4 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip3B9EHT4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip3B9EHT4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.03■□□□□ 0.8
Clip3B9EHT4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.03■□□□□ 0.8
Clip3B9EHT4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip3B9EHT4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.03■□□□□ 0.8
Clip3B9EHT4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clip3B9EHT4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clip3B9EHT4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.02■□□□□ 0.8
Clip3B9EHT4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.02■□□□□ 0.8
Clip3B9EHT4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clip3B9EHT4 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clip3B9EHT4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Clip3B9EHT4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Clip3B9EHT4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip3B9EHT4 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clip3B9EHT4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip3B9EHT4 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clip3B9EHT4 Gm40881-201ENSMUST00000223397 166 ntBASIC20.01■□□□□ 0.79
Clip3B9EHT4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip3B9EHT4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clip3B9EHT4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip3B9EHT4 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip3B9EHT4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Clip3B9EHT4 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clip3B9EHT4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Clip3B9EHT4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip3B9EHT4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip3B9EHT4 Gm10399-202ENSMUST00000202768 748 ntBASIC19.99■□□□□ 0.79
Clip3B9EHT4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.99■□□□□ 0.79
Clip3B9EHT4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip3B9EHT4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip3B9EHT4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Clip3B9EHT4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Clip3B9EHT4 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip3B9EHT4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Clip3B9EHT4 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip3B9EHT4 Gm15039-201ENSMUST00000118914 875 ntBASIC19.98■□□□□ 0.79
Clip3B9EHT4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Clip3B9EHT4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.98■□□□□ 0.79
Clip3B9EHT4 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.98■□□□□ 0.79
Clip3B9EHT4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.98■□□□□ 0.79
Clip3B9EHT4 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Clip3B9EHT4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Clip3B9EHT4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip3B9EHT4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip3B9EHT4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip3B9EHT4 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Clip3B9EHT4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Clip3B9EHT4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.97■□□□□ 0.79
Clip3B9EHT4 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.97■□□□□ 0.79
Clip3B9EHT4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Clip3B9EHT4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.97■□□□□ 0.79
Clip3B9EHT4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip3B9EHT4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Clip3B9EHT4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.96■□□□□ 0.79
Clip3B9EHT4 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Clip3B9EHT4 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms