Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Rrn3B2RS91 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Rrn3B2RS91 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rrn3B2RS91 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rrn3B2RS91 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rrn3B2RS91 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rrn3B2RS91 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rrn3B2RS91 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rrn3B2RS91 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.99■□□□□ 0.95
Rrn3B2RS91 Gm45102-201ENSMUST00000207427 857 ntBASIC20.99■□□□□ 0.95
Rrn3B2RS91 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rrn3B2RS91 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rrn3B2RS91 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rrn3B2RS91 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.98■□□□□ 0.95
Rrn3B2RS91 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.98■□□□□ 0.95
Rrn3B2RS91 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rrn3B2RS91 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rrn3B2RS91 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rrn3B2RS91 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.97■□□□□ 0.95
Rrn3B2RS91 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.97■□□□□ 0.95
Rrn3B2RS91 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rrn3B2RS91 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rrn3B2RS91 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rrn3B2RS91 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rrn3B2RS91 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rrn3B2RS91 Etf1-202ENSMUST00000180351 108 ntBASIC20.96■□□□□ 0.95
Rrn3B2RS91 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.96■□□□□ 0.95
Rrn3B2RS91 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.96■□□□□ 0.95
Rrn3B2RS91 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rrn3B2RS91 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Rrn3B2RS91 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Rrn3B2RS91 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Rrn3B2RS91 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rrn3B2RS91 Gm40881-201ENSMUST00000223397 166 ntBASIC20.95■□□□□ 0.94
Rrn3B2RS91 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rrn3B2RS91 Gm9959-201ENSMUST00000068277 390 ntBASIC20.95■□□□□ 0.94
Rrn3B2RS91 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rrn3B2RS91 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Rrn3B2RS91 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rrn3B2RS91 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rrn3B2RS91 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rrn3B2RS91 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rrn3B2RS91 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rrn3B2RS91 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Rrn3B2RS91 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rrn3B2RS91 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.94■□□□□ 0.94
Rrn3B2RS91 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.94■□□□□ 0.94
Rrn3B2RS91 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rrn3B2RS91 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rrn3B2RS91 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rrn3B2RS91 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rrn3B2RS91 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.93■□□□□ 0.94
Rrn3B2RS91 Gm7417-201ENSMUST00000192950 473 ntBASIC20.93■□□□□ 0.94
Rrn3B2RS91 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rrn3B2RS91 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Rrn3B2RS91 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rrn3B2RS91 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rrn3B2RS91 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Rrn3B2RS91 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrn3B2RS91 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Rrn3B2RS91 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.92■□□□□ 0.94
Rrn3B2RS91 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrn3B2RS91 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrn3B2RS91 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrn3B2RS91 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rrn3B2RS91 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Rrn3B2RS91 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rrn3B2RS91 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rrn3B2RS91 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rrn3B2RS91 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
Rrn3B2RS91 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Rrn3B2RS91 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Rrn3B2RS91 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.91■□□□□ 0.94
Rrn3B2RS91 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rrn3B2RS91 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.91■□□□□ 0.94
Rrn3B2RS91 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rrn3B2RS91 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rrn3B2RS91 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrn3B2RS91 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rrn3B2RS91 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Rrn3B2RS91 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrn3B2RS91 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rrn3B2RS91 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rrn3B2RS91 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrn3B2RS91 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Rrn3B2RS91 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrn3B2RS91 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrn3B2RS91 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rrn3B2RS91 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rrn3B2RS91 Gm14117-201ENSMUST00000122417 843 ntBASIC20.89■□□□□ 0.93
Rrn3B2RS91 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Rrn3B2RS91 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.89■□□□□ 0.93
Rrn3B2RS91 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rrn3B2RS91 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Rrn3B2RS91 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rrn3B2RS91 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Rrn3B2RS91 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rrn3B2RS91 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Rrn3B2RS91 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Rrn3B2RS91 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms