Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv3-4A0A140T8Q4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv3-4A0A140T8Q4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv3-4A0A140T8Q4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv3-4A0A140T8Q4 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Igkv3-4A0A140T8Q4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC13.07□□□□□ -0.32
Igkv3-4A0A140T8Q4 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-4A0A140T8Q4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-4A0A140T8Q4 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-4A0A140T8Q4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Igkv3-4A0A140T8Q4 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-4A0A140T8Q4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-4A0A140T8Q4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Igkv3-4A0A140T8Q4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Igkv3-4A0A140T8Q4 AC115037.1-201ENSMUST00000223391 2173 ntBASIC13.07□□□□□ -0.32
Igkv3-4A0A140T8Q4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Gm13889-201ENSMUST00000099689 1386 ntBASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Igkv3-4A0A140T8Q4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv3-4A0A140T8Q4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Igkv3-4A0A140T8Q4 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Igkv3-4A0A140T8Q4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv3-4A0A140T8Q4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv3-4A0A140T8Q4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv3-4A0A140T8Q4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv3-4A0A140T8Q4 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv3-4A0A140T8Q4 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv3-4A0A140T8Q4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Igkv3-4A0A140T8Q4 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Igkv3-4A0A140T8Q4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Igkv3-4A0A140T8Q4 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Igkv3-4A0A140T8Q4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Igkv3-4A0A140T8Q4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv3-4A0A140T8Q4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv3-4A0A140T8Q4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv3-4A0A140T8Q4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv3-4A0A140T8Q4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv3-4A0A140T8Q4 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv3-4A0A140T8Q4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv3-4A0A140T8Q4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv3-4A0A140T8Q4 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Igkv3-4A0A140T8Q4 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Igkv3-4A0A140T8Q4 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Igkv3-4A0A140T8Q4 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
Igkv3-4A0A140T8Q4 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv3-4A0A140T8Q4 Mir3960-201ENSMUST00000198213 73 ntBASIC13.02□□□□□ -0.33
Igkv3-4A0A140T8Q4 Gm7432-201ENSMUST00000210343 879 ntBASIC13.02□□□□□ -0.33
Igkv3-4A0A140T8Q4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC13.02□□□□□ -0.33
Igkv3-4A0A140T8Q4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv3-4A0A140T8Q4 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Igkv3-4A0A140T8Q4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC13.02□□□□□ -0.33
Igkv3-4A0A140T8Q4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv3-4A0A140T8Q4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv3-4A0A140T8Q4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Igkv3-4A0A140T8Q4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 AC153911.1-201ENSMUST00000220378 758 ntBASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Igkv3-4A0A140T8Q4 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-4A0A140T8Q4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Igkv3-4A0A140T8Q4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms