Protein–RNA interactions for Protein: A0A0B4J1P1

Trbv30, T cell receptor beta, variable 30 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv30A0A0B4J1P1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trbv30A0A0B4J1P1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv30A0A0B4J1P1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbv30A0A0B4J1P1 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv30A0A0B4J1P1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv30A0A0B4J1P1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv30A0A0B4J1P1 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv30A0A0B4J1P1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv30A0A0B4J1P1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv30A0A0B4J1P1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trbv30A0A0B4J1P1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv30A0A0B4J1P1 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trbv30A0A0B4J1P1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC15.72■□□□□ 0.11
Trbv30A0A0B4J1P1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv30A0A0B4J1P1 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv30A0A0B4J1P1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv30A0A0B4J1P1 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv30A0A0B4J1P1 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv30A0A0B4J1P1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv30A0A0B4J1P1 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv30A0A0B4J1P1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv30A0A0B4J1P1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC15.71■□□□□ 0.11
Trbv30A0A0B4J1P1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv30A0A0B4J1P1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Trbv30A0A0B4J1P1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trbv30A0A0B4J1P1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv30A0A0B4J1P1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv30A0A0B4J1P1 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trbv30A0A0B4J1P1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv30A0A0B4J1P1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trbv30A0A0B4J1P1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv30A0A0B4J1P1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv30A0A0B4J1P1 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trbv30A0A0B4J1P1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv30A0A0B4J1P1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv30A0A0B4J1P1 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.7■□□□□ 0.1
Trbv30A0A0B4J1P1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC15.7■□□□□ 0.1
Trbv30A0A0B4J1P1 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv30A0A0B4J1P1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv30A0A0B4J1P1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trbv30A0A0B4J1P1 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv30A0A0B4J1P1 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv30A0A0B4J1P1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv30A0A0B4J1P1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv30A0A0B4J1P1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv30A0A0B4J1P1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv30A0A0B4J1P1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trbv30A0A0B4J1P1 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trbv30A0A0B4J1P1 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Gm10399-202ENSMUST00000202768 748 ntBASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trbv30A0A0B4J1P1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv30A0A0B4J1P1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trbv30A0A0B4J1P1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trbv30A0A0B4J1P1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv30A0A0B4J1P1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv30A0A0B4J1P1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Trbv30A0A0B4J1P1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv30A0A0B4J1P1 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv30A0A0B4J1P1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv30A0A0B4J1P1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trbv30A0A0B4J1P1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv30A0A0B4J1P1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv30A0A0B4J1P1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Trbv30A0A0B4J1P1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv30A0A0B4J1P1 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Trbv30A0A0B4J1P1 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.65■□□□□ 0.1
Trbv30A0A0B4J1P1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.65■□□□□ 0.1
Trbv30A0A0B4J1P1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trbv30A0A0B4J1P1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Trbv30A0A0B4J1P1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv30A0A0B4J1P1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trbv30A0A0B4J1P1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC15.64■□□□□ 0.09
Trbv30A0A0B4J1P1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC15.64■□□□□ 0.09
Trbv30A0A0B4J1P1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms