Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.65■■□□□ 1.06
Pcdh7A0A0A6YY83 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh7A0A0A6YY83 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.64■■□□□ 1.05
Pcdh7A0A0A6YY83 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh7A0A0A6YY83 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh7A0A0A6YY83 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh7A0A0A6YY83 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh7A0A0A6YY83 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh7A0A0A6YY83 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh7A0A0A6YY83 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh7A0A0A6YY83 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh7A0A0A6YY83 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
Pcdh7A0A0A6YY83 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh7A0A0A6YY83 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Pcdh7A0A0A6YY83 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh7A0A0A6YY83 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh7A0A0A6YY83 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh7A0A0A6YY83 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh7A0A0A6YY83 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh7A0A0A6YY83 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh7A0A0A6YY83 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.62■■□□□ 1.05
Pcdh7A0A0A6YY83 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.62■■□□□ 1.05
Pcdh7A0A0A6YY83 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.62■■□□□ 1.05
Pcdh7A0A0A6YY83 Gm5812-201ENSMUST00000061073 957 ntBASIC21.62■■□□□ 1.05
Pcdh7A0A0A6YY83 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh7A0A0A6YY83 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh7A0A0A6YY83 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh7A0A0A6YY83 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh7A0A0A6YY83 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.61■■□□□ 1.05
Pcdh7A0A0A6YY83 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.61■■□□□ 1.05
Pcdh7A0A0A6YY83 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh7A0A0A6YY83 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh7A0A0A6YY83 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh7A0A0A6YY83 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh7A0A0A6YY83 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh7A0A0A6YY83 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.6■■□□□ 1.05
Pcdh7A0A0A6YY83 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh7A0A0A6YY83 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh7A0A0A6YY83 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh7A0A0A6YY83 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh7A0A0A6YY83 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh7A0A0A6YY83 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.6■■□□□ 1.05
Pcdh7A0A0A6YY83 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.6■■□□□ 1.05
Pcdh7A0A0A6YY83 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh7A0A0A6YY83 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh7A0A0A6YY83 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh7A0A0A6YY83 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh7A0A0A6YY83 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh7A0A0A6YY83 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh7A0A0A6YY83 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh7A0A0A6YY83 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.59■■□□□ 1.05
Pcdh7A0A0A6YY83 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.59■■□□□ 1.05
Pcdh7A0A0A6YY83 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh7A0A0A6YY83 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh7A0A0A6YY83 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh7A0A0A6YY83 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh7A0A0A6YY83 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh7A0A0A6YY83 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh7A0A0A6YY83 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh7A0A0A6YY83 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh7A0A0A6YY83 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Pcdh7A0A0A6YY83 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh7A0A0A6YY83 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.58■■□□□ 1.05
Pcdh7A0A0A6YY83 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.58■■□□□ 1.05
Pcdh7A0A0A6YY83 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.58■■□□□ 1.05
Pcdh7A0A0A6YY83 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdh7A0A0A6YY83 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh7A0A0A6YY83 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Pcdh7A0A0A6YY83 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.57■■□□□ 1.04
Pcdh7A0A0A6YY83 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh7A0A0A6YY83 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh7A0A0A6YY83 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdh7A0A0A6YY83 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh7A0A0A6YY83 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdh7A0A0A6YY83 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Pcdh7A0A0A6YY83 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.56■■□□□ 1.04
Pcdh7A0A0A6YY83 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdh7A0A0A6YY83 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh7A0A0A6YY83 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.55■■□□□ 1.04
Pcdh7A0A0A6YY83 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.55■■□□□ 1.04
Pcdh7A0A0A6YY83 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdh7A0A0A6YY83 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Pcdh7A0A0A6YY83 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh7A0A0A6YY83 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh7A0A0A6YY83 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh7A0A0A6YY83 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh7A0A0A6YY83 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh7A0A0A6YY83 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh7A0A0A6YY83 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh7A0A0A6YY83 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Pcdh7A0A0A6YY83 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh7A0A0A6YY83 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.53■■□□□ 1.04
Pcdh7A0A0A6YY83 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh7A0A0A6YY83 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh7A0A0A6YY83 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh7A0A0A6YY83 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh7A0A0A6YY83 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Pcdh7A0A0A6YY83 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh7A0A0A6YY83 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Pcdh7A0A0A6YY83 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms