Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav8n-2A0A075B633 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav8n-2A0A075B633 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.28■□□□□ 0.68
Trav8n-2A0A075B633 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.28■□□□□ 0.68
Trav8n-2A0A075B633 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trav8n-2A0A075B633 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav8n-2A0A075B633 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav8n-2A0A075B633 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav8n-2A0A075B633 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav8n-2A0A075B633 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav8n-2A0A075B633 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav8n-2A0A075B633 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.27■□□□□ 0.68
Trav8n-2A0A075B633 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.27■□□□□ 0.68
Trav8n-2A0A075B633 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Trav8n-2A0A075B633 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav8n-2A0A075B633 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.27■□□□□ 0.68
Trav8n-2A0A075B633 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav8n-2A0A075B633 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.27■□□□□ 0.67
Trav8n-2A0A075B633 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.26■□□□□ 0.67
Trav8n-2A0A075B633 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav8n-2A0A075B633 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav8n-2A0A075B633 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav8n-2A0A075B633 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav8n-2A0A075B633 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Trav8n-2A0A075B633 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
Trav8n-2A0A075B633 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Trav8n-2A0A075B633 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8n-2A0A075B633 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trav8n-2A0A075B633 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8n-2A0A075B633 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8n-2A0A075B633 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8n-2A0A075B633 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8n-2A0A075B633 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8n-2A0A075B633 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
Trav8n-2A0A075B633 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.25■□□□□ 0.67
Trav8n-2A0A075B633 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8n-2A0A075B633 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8n-2A0A075B633 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8n-2A0A075B633 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trav8n-2A0A075B633 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8n-2A0A075B633 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Trav8n-2A0A075B633 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8n-2A0A075B633 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.24■□□□□ 0.67
Trav8n-2A0A075B633 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.24■□□□□ 0.67
Trav8n-2A0A075B633 Gm43017-201ENSMUST00000198296 752 ntBASIC19.24■□□□□ 0.67
Trav8n-2A0A075B633 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8n-2A0A075B633 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8n-2A0A075B633 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8n-2A0A075B633 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav8n-2A0A075B633 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Trav8n-2A0A075B633 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav8n-2A0A075B633 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav8n-2A0A075B633 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav8n-2A0A075B633 Gm8493-201ENSMUST00000196881 489 ntBASIC19.22■□□□□ 0.67
Trav8n-2A0A075B633 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.22■□□□□ 0.67
Trav8n-2A0A075B633 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.21■□□□□ 0.67
Trav8n-2A0A075B633 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trav8n-2A0A075B633 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.21■□□□□ 0.67
Trav8n-2A0A075B633 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav8n-2A0A075B633 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav8n-2A0A075B633 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.21■□□□□ 0.67
Trav8n-2A0A075B633 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.21■□□□□ 0.67
Trav8n-2A0A075B633 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
Trav8n-2A0A075B633 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav8n-2A0A075B633 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav8n-2A0A075B633 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.21■□□□□ 0.67
Trav8n-2A0A075B633 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8n-2A0A075B633 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8n-2A0A075B633 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8n-2A0A075B633 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.2■□□□□ 0.66
Trav8n-2A0A075B633 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8n-2A0A075B633 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8n-2A0A075B633 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.2■□□□□ 0.66
Trav8n-2A0A075B633 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Trav8n-2A0A075B633 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8n-2A0A075B633 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8n-2A0A075B633 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav8n-2A0A075B633 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav8n-2A0A075B633 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav8n-2A0A075B633 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trav8n-2A0A075B633 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Trav8n-2A0A075B633 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav8n-2A0A075B633 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Trav8n-2A0A075B633 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav8n-2A0A075B633 Gm7143-201ENSMUST00000222811 859 ntBASIC19.19■□□□□ 0.66
Trav8n-2A0A075B633 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav8n-2A0A075B633 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms