Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Gm11175-201ENSMUST00000116172 543 ntBASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Gm7332-201ENSMUST00000118351 454 ntBASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav9n-4A0A075B631 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trav9n-4A0A075B631 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-4A0A075B631 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-4A0A075B631 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-4A0A075B631 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-4A0A075B631 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav9n-4A0A075B631 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav9n-4A0A075B631 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-4A0A075B631 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-4A0A075B631 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav9n-4A0A075B631 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-4A0A075B631 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-4A0A075B631 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-4A0A075B631 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav9n-4A0A075B631 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-4A0A075B631 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-4A0A075B631 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-4A0A075B631 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-4A0A075B631 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav9n-4A0A075B631 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trav9n-4A0A075B631 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav9n-4A0A075B631 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-4A0A075B631 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav9n-4A0A075B631 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-4A0A075B631 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav9n-4A0A075B631 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-4A0A075B631 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav9n-4A0A075B631 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-4A0A075B631 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-4A0A075B631 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav9n-4A0A075B631 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav9n-4A0A075B631 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav9n-4A0A075B631 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC14.21□□□□□ -0.14
Trav9n-4A0A075B631 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav9n-4A0A075B631 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav9n-4A0A075B631 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-4A0A075B631 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav9n-4A0A075B631 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav9n-4A0A075B631 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav9n-4A0A075B631 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC14.2□□□□□ -0.14
Trav9n-4A0A075B631 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-4A0A075B631 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-4A0A075B631 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-4A0A075B631 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav9n-4A0A075B631 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-4A0A075B631 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-4A0A075B631 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-4A0A075B631 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trav9n-4A0A075B631 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-4A0A075B631 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-4A0A075B631 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-4A0A075B631 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-4A0A075B631 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav9n-4A0A075B631 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-4A0A075B631 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-4A0A075B631 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trav9n-4A0A075B631 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-4A0A075B631 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trav9n-4A0A075B631 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC14.18□□□□□ -0.14
Trav9n-4A0A075B631 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-4A0A075B631 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav9n-4A0A075B631 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-4A0A075B631 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-4A0A075B631 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Trav9n-4A0A075B631 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-4A0A075B631 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-4A0A075B631 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav9n-4A0A075B631 Gm43403-201ENSMUST00000198011 1786 ntBASIC14.17□□□□□ -0.14
Trav9n-4A0A075B631 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-4A0A075B631 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-4A0A075B631 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-4A0A075B631 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-4A0A075B631 Nsd1-206ENSMUST00000224918 1001 ntBASIC14.16□□□□□ -0.14
Trav9n-4A0A075B631 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-4A0A075B631 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav9n-4A0A075B631 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
Trav9n-4A0A075B631 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-4A0A075B631 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-4A0A075B631 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC14.15□□□□□ -0.14
Trav9n-4A0A075B631 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav9n-4A0A075B631 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav9n-4A0A075B631 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-4A0A075B631 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav9n-4A0A075B631 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav9n-4A0A075B631 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms