Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trav12n-2A0A075B626 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav12n-2A0A075B626 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav12n-2A0A075B626 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trav12n-2A0A075B626 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav12n-2A0A075B626 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav12n-2A0A075B626 Gm9959-201ENSMUST00000068277 390 ntBASIC18.83■□□□□ 0.6
Trav12n-2A0A075B626 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.83■□□□□ 0.6
Trav12n-2A0A075B626 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trav12n-2A0A075B626 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav12n-2A0A075B626 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trav12n-2A0A075B626 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12n-2A0A075B626 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12n-2A0A075B626 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12n-2A0A075B626 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.82■□□□□ 0.6
Trav12n-2A0A075B626 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trav12n-2A0A075B626 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.82■□□□□ 0.6
Trav12n-2A0A075B626 Rps24-207ENSMUST00000224568 714 ntBASIC18.82■□□□□ 0.6
Trav12n-2A0A075B626 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12n-2A0A075B626 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.82■□□□□ 0.6
Trav12n-2A0A075B626 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12n-2A0A075B626 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav12n-2A0A075B626 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav12n-2A0A075B626 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav12n-2A0A075B626 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
Trav12n-2A0A075B626 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trav12n-2A0A075B626 Etf1-202ENSMUST00000180351 108 ntBASIC18.81■□□□□ 0.6
Trav12n-2A0A075B626 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav12n-2A0A075B626 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav12n-2A0A075B626 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trav12n-2A0A075B626 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav12n-2A0A075B626 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav12n-2A0A075B626 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav12n-2A0A075B626 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav12n-2A0A075B626 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav12n-2A0A075B626 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav12n-2A0A075B626 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC18.8■□□□□ 0.6
Trav12n-2A0A075B626 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.8■□□□□ 0.6
Trav12n-2A0A075B626 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav12n-2A0A075B626 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trav12n-2A0A075B626 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav12n-2A0A075B626 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12n-2A0A075B626 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12n-2A0A075B626 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12n-2A0A075B626 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12n-2A0A075B626 Gm45102-201ENSMUST00000207427 857 ntBASIC18.79■□□□□ 0.6
Trav12n-2A0A075B626 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Trav12n-2A0A075B626 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12n-2A0A075B626 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12n-2A0A075B626 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12n-2A0A075B626 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav12n-2A0A075B626 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav12n-2A0A075B626 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav12n-2A0A075B626 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.78■□□□□ 0.6
Trav12n-2A0A075B626 Gm7417-201ENSMUST00000192950 473 ntBASIC18.78■□□□□ 0.6
Trav12n-2A0A075B626 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav12n-2A0A075B626 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.78■□□□□ 0.6
Trav12n-2A0A075B626 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Trav12n-2A0A075B626 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav12n-2A0A075B626 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav12n-2A0A075B626 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
Trav12n-2A0A075B626 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav12n-2A0A075B626 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav12n-2A0A075B626 Gm14117-201ENSMUST00000122417 843 ntBASIC18.76■□□□□ 0.59
Trav12n-2A0A075B626 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.76■□□□□ 0.59
Trav12n-2A0A075B626 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.76■□□□□ 0.59
Trav12n-2A0A075B626 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.76■□□□□ 0.59
Trav12n-2A0A075B626 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.76■□□□□ 0.59
Trav12n-2A0A075B626 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Trav12n-2A0A075B626 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Trav12n-2A0A075B626 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav12n-2A0A075B626 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Trav12n-2A0A075B626 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav12n-2A0A075B626 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.75■□□□□ 0.59
Trav12n-2A0A075B626 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav12n-2A0A075B626 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav12n-2A0A075B626 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav12n-2A0A075B626 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.75■□□□□ 0.59
Trav12n-2A0A075B626 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav12n-2A0A075B626 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Trav12n-2A0A075B626 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12n-2A0A075B626 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12n-2A0A075B626 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12n-2A0A075B626 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Trav12n-2A0A075B626 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12n-2A0A075B626 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12n-2A0A075B626 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trav12n-2A0A075B626 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12n-2A0A075B626 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12n-2A0A075B626 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav12n-2A0A075B626 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
Trav12n-2A0A075B626 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.74■□□□□ 0.59
Trav12n-2A0A075B626 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Trav12n-2A0A075B626 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav12n-2A0A075B626 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav12n-2A0A075B626 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav12n-2A0A075B626 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Trav12n-2A0A075B626 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav12n-2A0A075B626 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav12n-2A0A075B626 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 102.6 ms